Construct: ORF ccsbBroad304_10784

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012199.1_s304c1, BRDN0000407136
Derived from:
ccsbBroadEn_10784
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DNAH6 (1768)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10784
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_011532657.1 14.5% 14.2% (many diffs)
2 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_017003522.2 14.5% 14.2% (many diffs)
3 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_017003523.2 14.5% 14.2% (many diffs)
4 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_011532655.2 14.2% 13.8% (many diffs)
5 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_011532654.1 13.5% 13.2% (many diffs)
6 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_017003521.1 13.4% 13.1% (many diffs)
7 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_011532653.1 13.2% 12.9% (many diffs)
8 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_011532652.1 13.2% 12.9% (many diffs)
9 human 1768 DNAH6 dynein axonemal heavy chain 6 NM_001370.2 13.1% 12.7% (many diffs)
10 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_006711956.2 13.1% 12.7% (many diffs)
11 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_011532649.3 13.1% 12.7% (many diffs)
12 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_011532650.3 13.1% 12.7% (many diffs)
13 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_011532660.1 11.4% 10.7% (many diffs)
14 human 1768 DNAH6 dynein axonemal heavy chain 6 XM_017003524.1 9.1% 8.9% (many diffs)
15 mouse 330355 Dnah6 dynein, axonemal, heavy cha... XM_006506302.4 14% 14.8% (many diffs)
16 mouse 330355 Dnah6 dynein, axonemal, heavy cha... XR_377473.4 13.7% (many diffs)
17 mouse 330355 Dnah6 dynein, axonemal, heavy cha... NM_001164669.1 11.5% 12.1% (many diffs)
18 mouse 330355 Dnah6 dynein, axonemal, heavy cha... XR_003956215.1 11% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1719
ORF length:
1653
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga acaaacaaaa ttgaacacta tactatgtca gacttttgta ttctgttatt
121tgtggtcttt gggtggaaac ctaactgaaa actactatga ttcttttgat acatttatta
181gaacacaatt tgatgataat cctgatgcca ggcttcccaa ttctggtgat ctgtggagca
241ttcatatgga ctttgacacc aaacggctgg atccctggga acgaatcata cctactttca
301aatacaaccg agatgttcca ttttttgaaa tgcttgtccc cacaactgac acagtgcgct
361atgggtatct aatggaaaaa ctactggcag tcaagcattc cgtgttgttt actggaataa
421ctggagtggg caagtctgtg attgcaaaag gattgctaaa taaaattcaa gaatcagctg
481gctatgtccc tgtttatctg aatttttctg ctcaaacttc atctgcaagg acacaagaga
541tcattgagtc aaaactggag agaaaaagaa aaaatattct aggagcaccg ggaaacaaac
601gaattgtgat ttttgttgat gatttaaaca tgcccagact ggatcgctat ggctctcagc
661ctccgattga attacttcgg cagtatcaag attttggggg attttatgac agaaacaaac
721tgttttggaa agaaatacag gatgtaacaa tcatatcggc atgtgcacct ccaggcggtg
781gccgcaaccc tgtgactccc cgcttcatca gacacttcag catgctgtgc ctcccaatgc
841cctcagagca cagtctgaaa cagatttttc aggccatctt aaatggtttc ctgagtgact
901ttccaccagc tgtaaagcaa actgcatcaa gcattgtaga agcctcagtt gagatttata
961acaaaatgag tgttgacctc ctgccaacac ccgccaagtc ccattatgtc tttaacttga
1021gggacttatc caaatgtgtg caagacaaac attttggaat tgcaattgac ctggaatatt
1081ttttgaataa gcccatcata tttggagatt tcattaagtt tggagcagat aaagctgatc
1141ggatttatga tgacatgcct gatatagaga aaactgcaaa tgttctacag gactatcttg
1201atgattataa tctcacaaat cccaaagaag taaagttggt gttcttccag gatgctatag
1261aacatgtttc aaggattgct cggatgatac gtcaagaaag aggcaatgcc ctgcttgttg
1321gagtaggagg cacaggaaag cagtcactca cgagacttgc agctcatata tgcggttaca
1381aatgtttgca gattgaactc agccggggat ataattatga tagttttcat gaagacctga
1441ggaagttgta caaaatggct ggtgtagaag acaagaatat ggttttcctt ttcactgaca
1501cccagattgt agtggaggag ttcctagaag atataaataa catcctgaac tcaggtgaag
1561tgcctaattt atttgaaaag gatgaactgg agcaggtttt agcggccacc agaccaagag
1621caaaagaagt aggaatttct gaggggaaca gagacgaggt aggatgtgcc agagtagtta
1681tgtggcttta tcacaaaaac gtttcttcac cttttattta cccaactttc ttgtacaaag
1741tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
1801gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

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