Construct: ORF ccsbBroad304_11108

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012603.1_s304c1, BRDN0000402114
Derived from:
ccsbBroadEn_11108
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RPS4X (6191)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11108
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6191 RPS4X ribosomal protein S4 X-linked NM_001007.5 75.1% 75.2% 1_195del;492G>A
2 human 6192 RPS4Y1 ribosomal protein S4 Y-link... NM_001008.4 62.1% 68.4% (many diffs)
3 human 140032 RPS4Y2 ribosomal protein S4 Y-link... NM_001039567.3 61.6% 67.3% (many diffs)
4 mouse 20102 Rps4x ribosomal protein S4, X-linked XM_011247553.2 73.7% 80.8% (many diffs)
5 mouse 20102 Rps4x ribosomal protein S4, X-linked NM_009094.2 68.6% 75.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
660
ORF length:
594
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgca gcggttcatt aaaatcgatg gcaaggtccg aactgatata acctaccctg
121ctggattcat ggatgtcatc agcattgaca agacgggaga gaatttccgt ctgatctatg
181acaccaaggg tcgctttgct gtacatcgta ttacacctga ggaggccaag tacaagttgt
241gcaaagtgag aaagatcttt gtgggcacaa aaggaatccc tcatctggtg actcatgatg
301cccgcaccat ccgctacccc gatcccctca tcaaggtgaa tgataccatt cagattgatt
361tagagactgg caagattact gatttcatca agttcgacac tggtaacctg tgtatggtga
421ctggaggtgc taacctagga agaattggtg tgatcaccaa cagagagagg caccctggat
481cttttgacgt ggttcacgtg aaagatgcca atggcaacag ctttgccact cgactttcca
541acatttttgt tattggcaag ggcaacaaac catggatttc tcttccccga ggaaagggta
601tccgcctcac cattgctgaa gagagagaca aaagactggc ggccaaacag agcagtgggt
661gcccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
721attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
781ggatta

Download FASTA (ORF) (Full)