Construct: ORF ccsbBroad304_11889

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000244.1_s304c1, BRDN0000398698
Derived from:
ccsbBroadEn_11889
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AAMDC (28971)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11889
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 28971 AAMDC adipogenesis associated Mth... NM_001316960.1 69.6% 63.1% (many diffs)
2 human 28971 AAMDC adipogenesis associated Mth... NM_001316961.1 69.6% 63.1% (many diffs)
3 human 28971 AAMDC adipogenesis associated Mth... NM_001316962.1 69.6% 63.1% (many diffs)
4 human 28971 AAMDC adipogenesis associated Mth... NM_024684.3 69.6% 63.1% (many diffs)
5 human 28971 AAMDC adipogenesis associated Mth... XM_011544969.2 69.6% 63.1% (many diffs)
6 human 28971 AAMDC adipogenesis associated Mth... NM_001316958.1 60.5% 56.8% (many diffs)
7 human 28971 AAMDC adipogenesis associated Mth... NM_001363564.1 60.2% 54.6% (many diffs)
8 human 28971 AAMDC adipogenesis associated Mth... NM_001316957.1 56.4% 53% (many diffs)
9 human 28971 AAMDC adipogenesis associated Mth... XM_017017620.1 50% 47% (many diffs)
10 human 28971 AAMDC adipogenesis associated Mth... NR_133637.1 34.2% (many diffs)
11 mouse 66273 Aamdc adipogenesis associated Mth... NM_183251.3 62.8% 57.3% (many diffs)
12 mouse 66273 Aamdc adipogenesis associated Mth... XM_006508114.3 62.8% 57.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
330
ORF length:
264
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgac ttcccctgaa attgcttcct tatcatgggg gcaaatgaaa gtaaaaggct
121ctaatacaac ctataaggac tgcaaagtat ggccaggggg tagtcggact tgggattgga
181gagaaacagg aactgagcat tctcctggtg tgcagcctgc agatgtgaag gaagttgttg
241agaagggtgt acagactctt gtgattggcc gagggatgag tgaggccttg aaggatggaa
301tacagggggc acagttagat ctgaattgtt acccaacttt cttgtacaaa gtggttggta
361agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
421ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)