Construct: ORF ccsbBroad304_12324

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009455.1_s304c1, BRDN0000461125
Derived from:
ccsbBroadEn_12324
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CABP4 (57010)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12324
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57010 CABP4 calcium binding protein 4 NM_001300895.2 100% 100%
2 human 57010 CABP4 calcium binding protein 4 NM_001300896.2 100% 100%
3 human 57010 CABP4 calcium binding protein 4 XM_011545183.2 100% 100%
4 human 57010 CABP4 calcium binding protein 4 XM_017018025.1 100% 100%
5 human 57010 CABP4 calcium binding protein 4 XM_024448616.1 100% 100%
6 human 57010 CABP4 calcium binding protein 4 NM_145200.4 60.8% 55.3% (many diffs)
7 human 57010 CABP4 calcium binding protein 4 XM_024448615.1 60.8% 55.3% (many diffs)
8 human 57010 CABP4 calcium binding protein 4 XM_011545182.2 58.6% 35.4% (many diffs)
9 human 57010 CABP4 calcium binding protein 4 XM_011545181.2 56.7% 51.6% (many diffs)
10 human 57010 CABP4 calcium binding protein 4 XM_005274114.3 25.3% 17.8% (many diffs)
11 mouse 73660 Cabp4 calcium binding protein 4 XM_017318298.1 78.7% 80.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
576
ORF length:
510
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgac agagccgtgg ctggccctgg ggacatcctg gactctcccc ctgcaggacc
121gcgaactggg ccccgaggag ctagacgagc ttcaggccgc cttcgaggag tttgacactg
181accgtgacgg ctacatcagc caccgggagc tgggtgactg catgcggacc ctgggctaca
241tgcccaccga gatggagctc ctggaggtct cgcagcacat caagatgcgc atgggcggcc
301gtgtggactt tgaggagttt gtagaactga taggcccaaa gctgagggag gagacggcgc
361acatgctggg ggtgcgagag ctgcgcatcg ccttccgaga gtttgacagg gacagggatg
421gacgaattac ggtggcggag ctgcgggagg cggtaccggc tctgctcggg gagccgctgg
481cgggtcctga gctggacgag atgctccgag aagtggacct caatggggat ggcaccgtag
541actttgacga gtttgtgatg atgctctccc gccactgccc aactttcttg tacaaagtgg
601ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
661ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)