Construct: ORF ccsbBroad304_12875

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017360.1_s304c1, BRDN0000401731
Derived from:
ccsbBroadEn_12875
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TBRG1 (84897)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12875
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84897 TBRG1 transforming growth factor ... XM_017018442.2 71.9% 71.9% 1_219del
2 human 84897 TBRG1 transforming growth factor ... XM_005271709.4 70.8% 70.8% 1_231del
3 human 84897 TBRG1 transforming growth factor ... NM_032811.3 45.4% 45.4% 1_672del
4 human 84897 TBRG1 transforming growth factor ... NR_016021.2 11.2% 1_755del;1317_5007del
5 human 84897 TBRG1 transforming growth factor ... XR_428983.4 10.7% 1_955del;1517_5205del
6 human 84897 TBRG1 transforming growth factor ... XR_001748012.2 10.7% 1_987del;1549_5237del
7 human 84897 TBRG1 transforming growth factor ... XR_001748011.2 10.4% 1_1107del;1669_5357del
8 mouse 21376 Tbrg1 transforming growth factor ... NM_025289.3 39.5% 37.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
630
ORF length:
561
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gaagtgccca gaccagaagt gtctatatac ctgtcagatc aaggatggtg
121gtgtgcagcc tcagtttgaa attgttcctg aagatgaccc ccagaatgcc attgtcagct
181cttctgcaga tgcttgtcat gcagaactgc tcaggactat aagcactact atggggaaac
241taatgcctaa cctgcttcca gctggagctg acttttttgg attttctcat ccagccatcc
301acaacctgat ccagagctgt ccaggagctc gaaaatgcat caattaccag tgggtgaaat
361ttgatgtgtg caaacctgga gatgggcagc tacctgaggg gctgccggag aatgatgcag
421ctatgagctt tgaagccttt cagagacaga tctttgatga agatcagaat gatccccttc
481tgccaggatc cttggacctc ccagagcttc agcctgcagc ctttgtgtct tcttaccagc
541ccatgtacct gacacatgaa cccttggtag atactcacct gcagcacttg aagtctccat
601cacagggtag cccaattcag tcttcagatt tgccaacttt cttgtacaaa gtggttggta
661agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
721ggtggcgcgt taagtcgaca atcaacctct ggatta

Download FASTA (ORF) (Full)