Construct: ORF ccsbBroad304_13261

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007221.1_s304c1, BRDN0000401310
Derived from:
ccsbBroadEn_13261
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZDHHC8P1 (150244)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13261
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 29801 ZDHHC8 zinc finger DHHC-type conta... NM_013373.4 13.2% 12.4% (many diffs)
2 human 29801 ZDHHC8 zinc finger DHHC-type conta... NM_001185024.2 13% 12.2% (many diffs)
3 human 29801 ZDHHC8 zinc finger DHHC-type conta... XM_006724239.2 13% 12.2% (many diffs)
4 human 150244 ZDHHC8P1 zinc finger DHHC-type conta... NR_003950.1 12.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
402
ORF length:
333
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcatccatc caggagcgca aggacaggga ggagcgtgag tgcctgctgc
121gctcccaggc cgactcactc ttcggcgact caggcgtcta tgatgctccc agctcctaca
181gcctgcagca ggccagtgtg ctgtctgagg gcttccgagg tcctacgctg tgctacagct
241ctacagatga ccttgtggcc aggcccggct tcggcggcgc ctgcaaccct gtcctgcaga
301catcattgtc ctcgctttcc agctccgtga gccgtgcact gcggacgtcg tcctcctccc
361tgcaggctga tcaggtgggg aagctgaggc aggaagccct tttgccaact ttcttgtaca
421aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
481ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)