Construct: ORF ccsbBroad304_13273

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006276.1_s304c1, BRDN0000410519
Derived from:
ccsbBroadEn_13273
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
METTL21A (151194)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13273
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 151194 METTL21A methyltransferase like 21A NM_001330131.2 100% 100%
2 human 151194 METTL21A methyltransferase like 21A NM_001330133.1 100% 100%
3 human 151194 METTL21A methyltransferase like 21A NM_001330135.2 100% 100%
4 human 151194 METTL21A methyltransferase like 21A XM_017003446.1 86.9% 86.4% (many diffs)
5 human 151194 METTL21A methyltransferase like 21A XM_017003447.1 86.9% 86.4% (many diffs)
6 human 151194 METTL21A methyltransferase like 21A XM_024452726.1 83.3% 83.3% 259_312del
7 human 151194 METTL21A methyltransferase like 21A XM_017003445.1 78.2% 78.2% 1_75del
8 human 151194 METTL21A methyltransferase like 21A NM_001308021.3 69.9% 68.5% (many diffs)
9 human 151194 METTL21A methyltransferase like 21A NM_001330132.1 69.9% 68.5% (many diffs)
10 human 151194 METTL21A methyltransferase like 21A NM_001330136.1 69.9% 68.5% (many diffs)
11 human 151194 METTL21A methyltransferase like 21A XM_024452724.1 69.9% 68.5% (many diffs)
12 human 151194 METTL21A methyltransferase like 21A XM_024452725.1 69.9% 68.5% (many diffs)
13 human 151194 METTL21A methyltransferase like 21A XM_017003444.1 69.8% 69.5% (many diffs)
14 human 151194 METTL21A methyltransferase like 21A XM_011510729.2 67.6% 67.6% 1_75del;334_387del
15 human 151194 METTL21A methyltransferase like 21A XM_011510727.3 58.5% 57.2% (many diffs)
16 human 151194 METTL21A methyltransferase like 21A XM_011510728.3 58.5% 57.2% (many diffs)
17 human 151194 METTL21A methyltransferase like 21A NM_001127395.3 41.1% 39.9% (many diffs)
18 human 151194 METTL21A methyltransferase like 21A NM_001330130.2 41.1% 39.9% (many diffs)
19 human 151194 METTL21A methyltransferase like 21A NM_001330134.1 41.1% 39.9% (many diffs)
20 human 151194 METTL21A methyltransferase like 21A NM_145280.6 41.1% 39.9% (many diffs)
21 human 151194 METTL21A methyltransferase like 21A XM_005246339.4 41.1% 39.9% (many diffs)
22 human 151194 METTL21A methyltransferase like 21A XM_005246340.4 41.1% 39.9% (many diffs)
23 human 151194 METTL21A methyltransferase like 21A XM_024452722.1 41.1% 39.9% (many diffs)
24 human 151194 METTL21A methyltransferase like 21A XM_024452723.1 41.1% 39.9% (many diffs)
25 human 151194 METTL21A methyltransferase like 21A NM_001330137.1 37.1% 36.4% (many diffs)
26 human 151194 METTL21A methyltransferase like 21A XM_005246336.3 37.1% 36.4% (many diffs)
27 human 151194 METTL21A methyltransferase like 21A XM_005246337.4 37.1% 36.4% (many diffs)
28 human 151194 METTL21A methyltransferase like 21A XM_006712327.3 37.1% 36.4% (many diffs)
29 human 151194 METTL21A methyltransferase like 21A XM_024452721.1 37.1% 36.4% (many diffs)
30 human 151194 METTL21A methyltransferase like 21A XM_011510725.2 36.8% 35.8% (many diffs)
31 human 151194 METTL21A methyltransferase like 21A XM_011510724.2 33.6% 32.9% (many diffs)
32 mouse 67099 Mettl21a methyltransferase like 21A NM_025964.3 35.9% 36.2% (many diffs)
33 mouse 67099 Mettl21a methyltransferase like 21A XM_006496203.3 35.9% 36.2% (many diffs)
34 mouse 67099 Mettl21a methyltransferase like 21A XM_006496204.3 35.9% 36.2% (many diffs)
35 mouse 67099 Mettl21a methyltransferase like 21A XR_001785519.1 11.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
336
ORF length:
270
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc cctcgtgccc tatgaggaga ccacggaatt tgggttgcag aaattccaca
121agcctcttgc aactttttcc tttgcaaacc acacgatcca gatccggcag gactggagac
181acctgggagt cgcagcggtg gtttgggatg cggccatcgt tctttccaca tacctggaga
241tgggagctgt ggagctcagg ggccgctctg ccgtggagct gggtgctggc acggggctgg
301tgggcatagt ggctgccctg ctgggaggtg gaatttaccc aactttcttg tacaaagtgg
361ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
421ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)

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