Construct: ORF ccsbBroad304_13636

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011595.1_s304c1, BRDN0000401393
Derived from:
ccsbBroadEn_13636
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LHFPL4 (375323)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13636
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 375323 LHFPL4 LHFPL tetraspan subfamily m... NM_198560.3 93.9% 93.9% 1_45del
2 human 375323 LHFPL4 LHFPL tetraspan subfamily m... XM_017006359.1 93.9% 93.9% 1_45del
3 human 375323 LHFPL4 LHFPL tetraspan subfamily m... XM_017006360.1 49.3% 49.3% (many diffs)
4 mouse 269788 Lhfpl4 lipoma HMGIC fusion partner... NM_177763.3 88.2% 92.3% (many diffs)
5 mouse 269788 Lhfpl4 lipoma HMGIC fusion partner... XM_017321600.1 88.2% 92.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
765
ORF length:
696
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcggaactcg cgggccatcg gcgtgctgtg ggccatcttc accatctgct
121tcgccatcat caacgtggtg gtcttcatcc agccctactg ggtgggcgac agcgtgagca
181cccccaagcc tggctacttc ggcctcttcc actactgcgt gggcagcggg ctggcgggcc
241gcgagctcac ctgccggggc tccttcaccg acttcagcac catcccgtcc agcgccttca
301aggcggccgc cttcttcgtg ctgctctcca tggtgctgat cctcggctgc atcacctgct
361tttcgctttt cttcttctgc aacacggcta cggtctacaa gatctgcgcc tggatgcagc
421tcttggcagc tctgtgcctc gtcctgggct gcatgatctt tcctgatggc tgggatgccg
481agaccatccg ggacatgtgt ggggccaaga cggggaagta ctccctgggg gactgttcag
541tgcgctgggc atacatcctg gccatcatcg gcatcctcaa cgccctcatc ctctccttcc
601tcgccttcgt gctgggcaac cggcaaacag acctgctgca ggaggagctc aagccggaga
661acaaagattt tgtgggctct acagtaagct ccgtgttgcg gcccgggggt gatgtctctg
721gatggggagt ccttccctgc cccgtggctc actcacaggg acccttgcca actttcttgt
781acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
841gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)