Construct: ORF ccsbBroad304_13919

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002529.1_s304c1, BRDN0000461164
Derived from:
ccsbBroadEn_13919
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PGM5 (5239)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13919
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5239 PGM5 phosphoglucomutase 5 XM_011518782.3 74.7% 73.6% (many diffs)
2 human 5239 PGM5 phosphoglucomutase 5 XM_024447573.1 74.7% 73.6% (many diffs)
3 human 5239 PGM5 phosphoglucomutase 5 XM_011518783.3 74.5% 73.3% (many diffs)
4 human 5239 PGM5 phosphoglucomutase 5 NM_021965.4 57.2% 56.9% (many diffs)
5 human 595135 PGM5P2 phosphoglucomutase 5 pseudo... NR_002836.2 47.6% (many diffs)
6 mouse 226041 Pgm5 phosphoglucomutase 5 NM_175013.2 52.3% 55.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1044
ORF length:
978
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggt ggtggtcagc gacagcaggt actttagcag gacggccatc gagatcgtgg
121tgcagatggc cgcggccaac gggattggac gactgattat tggacagaat ggcatcttgt
181cgacacctgc ggtctcctgc attatcagga agatcaaggc agctggtgga atcattctaa
241cagccagcca ctgccctgga ggaccagggg gagagtttgg agtgaagttt aatgttgcca
301atggaggtcc tgcacccgat gttgtctcag acaaaatcta ccaaatcagc aaaacgattg
361aggaatatgc tatatgtcct gatctccgaa tcgacctatc tcgactagga agacaagaat
421ttgacctaga aaacaaattc aaaccattca gagtggagat agtggaccca gtggatatct
481atcttaacct ccttcggacc atctttgact ttcatgccat caagggtttg ctgactggac
541ccagccaact gaagattcgc attgacgcaa tgcacggagt tatgggacct tatgtgagaa
601aagttctgtg tgatgagctg ggggccccag ccaattctgc aataaactgt gttcccctgg
661aagactttgg agggcagcac cctgacccaa acctgacata tgcaacgact cttctggaag
721caatgaaagg aggagaatat ggatttggag ctgcatttga tgctgatggg gaccgttata
781tgatcctagg ccaaaatggc ttctttgtga gcccttctga ctccctggcc atcattgctg
841ccaacctctc ttgcattcca tatttccgtc agatgggggt ccgcgggttt gggaggagta
901tgccaaccag catggccctg gacagagtgg ccaaatcaat gaaggtccct gtatatgaga
961ccccagctgg atggagattc ttctcaaatc tgatggactc aggacgttgc aatctgtgtg
1021gggaagagag ctttggcact gtttacccaa ctttcttgta caaagtggtt ggtaagccta
1081tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc
1141gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)