Construct: ORF ccsbBroad304_14196

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015132.1_s304c1, BRDN0000399027
Derived from:
ccsbBroadEn_14196
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FGGY (55277)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14196
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350796.2 99.9% 99.7% 908A>G
2 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001673.2 99.9% 99.7% 908A>G
3 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448220.1 99.9% 99.7% 908A>G
4 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001656.1 94.7% 94.6% 885_956del;980A>G
5 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001657.2 94.7% 94.6% 885_956del;980A>G
6 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001659.2 94.7% 94.6% 885_956del;980A>G
7 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001660.2 94.7% 94.6% 885_956del;980A>G
8 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001661.2 94.7% 94.6% 885_956del;980A>G
9 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001662.2 94.7% 94.6% 885_956del;980A>G
10 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001663.2 94.7% 94.6% 885_956del;980A>G
11 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001664.2 94.7% 94.6% 885_956del;980A>G
12 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350797.2 92.3% 88.4% (many diffs)
13 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350792.2 88.6% 88.4% 1_168del;1076A>G
14 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350793.2 88.6% 88.4% 1_168del;1076A>G
15 human 55277 FGGY FGGY carbohydrate kinase do... NM_001244714.2 88.3% 82% (many diffs)
16 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001668.1 87.5% 84% (many diffs)
17 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001669.2 87.5% 84% (many diffs)
18 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001670.2 87.5% 84% (many diffs)
19 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001671.1 87.5% 84% (many diffs)
20 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350799.2 86.2% 82.3% 908A>G;1080_1081ins95;1137_1138ins85
21 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448185.1 84.5% 84.3% 1_168del;1053_1124del;1148A>G
22 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448196.1 84.5% 84.3% 1_168del;1053_1124del;1148A>G
23 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350795.2 84% 78.2% (many diffs)
24 human 55277 FGGY FGGY carbohydrate kinase do... XM_011541736.3 84% 78.2% (many diffs)
25 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001655.1 84% 78.2% (many diffs)
26 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350798.2 81.7% 78.1% (many diffs)
27 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350791.2 79.6% 79.4% 1_336del;1244A>G
28 human 55277 FGGY FGGY carbohydrate kinase do... NM_018291.4 79.6% 79.4% 1_336del;1244A>G
29 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001645.1 79.6% 79.4% 1_336del;1244A>G
30 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001646.1 79.6% 79.4% 1_336del;1244A>G
31 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448227.1 78% 77.9% 0_1ins288;620A>G
32 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448229.1 78% 77.9% 0_1ins288;620A>G
33 human 55277 FGGY FGGY carbohydrate kinase do... NM_001113411.2 76.2% 76.1% 1_336del;1221_1292del;1316A>G
34 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350790.2 76.2% 76.1% 1_336del;1221_1292del;1316A>G
35 human 55277 FGGY FGGY carbohydrate kinase do... XM_011541730.1 76.2% 76.1% 1_336del;1221_1292del;1316A>G
36 human 55277 FGGY FGGY carbohydrate kinase do... XM_011541731.1 76.2% 76.1% 1_336del;1221_1292del;1316A>G
37 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001643.2 76.2% 76.1% 1_336del;1221_1292del;1316A>G
38 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448176.1 76.2% 76.1% 1_336del;1221_1292del;1316A>G
39 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001677.1 74% 73.8% 0_1ins288;597_668del;692A>G
40 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001678.1 74% 73.8% 0_1ins288;597_668del;692A>G
41 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350794.2 68.7% 65.7% (many diffs)
42 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001652.1 68.7% 65.7% (many diffs)
43 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448207.1 68.7% 65.7% (many diffs)
44 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001649.1 65.8% 62.9% (many diffs)
45 human 55277 FGGY FGGY carbohydrate kinase do... XR_001737286.1 60.9% (many diffs)
46 human 55277 FGGY FGGY carbohydrate kinase do... XR_001737285.1 60.2% (many diffs)
47 human 55277 FGGY FGGY carbohydrate kinase do... XR_001737284.1 58.9% (many diffs)
48 human 55277 FGGY FGGY carbohydrate kinase do... NM_001278224.2 57.3% 57.1% 0_1ins561;347A>G
49 human 55277 FGGY FGGY carbohydrate kinase do... XR_001737287.1 54.1% (many diffs)
50 human 55277 FGGY FGGY carbohydrate kinase do... NR_103473.2 52% (many diffs)
51 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001679.1 45.1% 44.6% (many diffs)
52 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503474.1 88.8% 92.4% (many diffs)
53 mouse 75578 Fggy FGGY carbohydrate kinase do... NM_001113412.1 70.6% 73.5% (many diffs)
54 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503461.3 70.6% 73.5% (many diffs)
55 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240633.2 69.6% 72.5% (many diffs)
56 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_017320432.1 69.2% 71% (many diffs)
57 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240636.1 64.8% 66.7% (many diffs)
58 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240635.1 64.4% 65.3% (many diffs)
59 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240637.2 63.9% 66.4% (many diffs)
60 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240639.2 63.8% 65.7% (many diffs)
61 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_017320430.1 60.6% 54.8% (many diffs)
62 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_017320429.1 59.7% 54% (many diffs)
63 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503468.3 58% 53.5% (many diffs)
64 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503472.3 57.8% 54.7% (many diffs)
65 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240644.1 57.4% 53.3% (many diffs)
66 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503470.3 57.1% 53.8% (many diffs)
67 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240643.2 57% 53.9% (many diffs)
68 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240645.1 52.2% 54.2% (many diffs)
69 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503476.1 51.3% 52.8% (many diffs)
70 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_017320431.1 51.3% 47.9% (many diffs)
71 mouse 75578 Fggy FGGY carbohydrate kinase do... XR_001784213.1 44.6% (many diffs)
72 mouse 75578 Fggy FGGY carbohydrate kinase do... NM_029347.2 43% 43.1% (many diffs)
73 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503475.1 42.4% 42.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1383
ORF length:
1317
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtg gctggaccat cgagcagtca gtcaagttaa caggatcaat gagaccaagc
121acagtgtcct ccagtacgtc gggggggtga tgtctgtgga aatgcaggcc ccgaaacttc
181tgtggctgaa agagaacttg agagagattt gctgggataa ggcgggacat ttctttgatc
241tcccggactt cttatcgtgg aaggcaacag gtgtcacagc acggtctctc tgctccctgg
301tgtgtaagtg gacatattca gcagagaaag gctgggacga cagtttctgg aaaatgattg
361gtttggaaga ctttgttgca gataattaca gcaaaatagg aaaccaagtg ctacctcctg
421gagcttctct tggaaatggg ctcacaccag aggcagcaag agaccttggc cttctccctg
481ggattgcggt cgcagcttca ctcattgatg cccatgcagg aggactagga gtgattgggg
541cagatgtgag agggcacggc ctcatctgtg aggggcagcc agtgacgtca cggctggctg
601tcatctgtgg aacgtcttct tgtcacatgg ggatcagcaa agacccgatt tttgtaccag
661gcgtctgggg gccttatttc tcagccatgg tacctgggtt ctggctgaat gaaggtggtc
721agagcgttac tggaaaattg atagaccaca tggtacaagg ccatgctgct tttccagaac
781tacaagtaaa ggccacagcc agatgccaga gtatatatgc atatttgaac agtcacctgg
841atctgattaa gaaggctcag cctgtgggtt tccttactgt tgatttacat gtttggccag
901atttccatgg caaccggtct cccttagcag atctgacact aaagggcatg gtcaccggat
961tgaaactgtc tcgggacctt gatgatcttg ccattctcta cctggccaca gttcaagcca
1021ttgctttggg gactcgcttc attatagaag ccatggaggc agcagggcac tcaatcagta
1081ctcttttcct atgtggaggc ctcagcaaga atcccctttt tgtgcaaatg catgcggaca
1141ttactggcat gcctgtggtc ctgtcgcaag aggtggagtc cgttcttgtg ggtgctgctg
1201ttctgggtgc ctgtgcctca ggggatttcg cttctgtaca ggaagcaatg gcaaaaatga
1261gcaaagttgg gaaagttgtg ttcccgagac tacaggataa aaaatactat gataagaaat
1321accaagtatt cctgaagctg gttgaacacc agaaggagta tttggcgatc atgaatgatg
1381actgcccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
1441tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
1501tctggatta

Download FASTA (ORF) (Full)