Construct: ORF ccsbBroad304_14530

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018837.1_s304c1, BRDN0000459321
Derived from:
ccsbBroadEn_14530
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
ACVR2B (93)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14530
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 93 ACVR2B activin A receptor type 2B NM_001106.4 99.3% 43.2% (many diffs)
2 human 93 ACVR2B activin A receptor type 2B XM_017007515.2 96.7% 39.6% (many diffs)
3 human 93 ACVR2B activin A receptor type 2B XM_017007514.1 95.7% 40.1% (many diffs)
4 human 93 ACVR2B activin A receptor type 2B XM_017007516.1 95.4% 40.1% (many diffs)
5 human 93 ACVR2B activin A receptor type 2B XM_005265583.3 94.5% 39.4% (many diffs)
6 mouse 11481 Acvr2b activin receptor IIB NM_001313757.1 91.6% 42.8% (many diffs)
7 mouse 11481 Acvr2b activin receptor IIB XM_006511926.3 90% 41.2% (many diffs)
8 mouse 11481 Acvr2b activin receptor IIB NM_007397.3 87.5% 40.9% (many diffs)
9 mouse 11481 Acvr2b activin receptor IIB XR_379846.3 13.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
783
ORF length:
714
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gacggcgccc tgggtggccc tcgccctcct ctggggatcg ctgtgcgccg
121gctctgggcg tggggaggct gagacacggg agtgcatcta ctacaacgcc aactgggagc
181tggagcgcac caaccagagc ggcctggagc gctgcgaagg cgagcaggac aagcggctgc
241actgctacgc ctcctggcgc aacagctctg gcaccatcga gctcgtgaag aagggctgct
301ggctagatga cttcaactgc tacgataggc aggagtgtgt ggccactgag gagaaccccc
361aggtgtactt ctgctgctgt gaaggcaact tctgcaacga gcgcttcact catttgccag
421aggctggggg cccggaagtc acgtacgagc cacccccgac agcccccacc ctgctcacgg
481tgctggccta ctcactgctg cccatcgggg gcctttccct catcgtcctg ctggcctttt
541ggatgtaccg gcatcgcaag cccccctacg gtcatgtgga catccatgag gaccctgggc
601ctccaccacc atcccctctg gtgggcctga agccactgca gctgctggag atcaaggctc
661gggggcgctt tggctgtgtc tggaaggccc agctcatgaa tgactttgta gctgtcaaga
721tcttcccact ccagacaagc agtcgtggca gagtgaacgg gagatcttca gcacacctgg
781catgaagcac gagaacctgc tacagttcat tgctgccgag aagccgaggc tccaacctcg
841aaagtagagc tgtggctcat cacggccttc catgacangg nnnccctcac ggattacntc
901aaggggaaca tcatcacatg gaacgaactg tgtcatgtag cagagacgat gtcacgaggc
961ctctcatacc tgcatgagga tgtgccctgg tgccgtggcg agggccacaa gccgtctatt
1021gcccacaggg actttaaaag taagaatgta ttgctgaaga gcgacctcac agccgtgctg
1081gctgactttg gcttggctgt tcgatttgag ccagggaaac ctccagggga cacccacgga
1141caggtaggca cgagacggta catggctcct gaggtgctcg agggagccat caacttccag
1201agagatgcct tcctgcgcat tgacatgtat gccatggggt tggtgctgtg ggagcttgtg
1261tctcgctgca aggctgcaga cggacccgtg gatgagtaca tgctgccctt tgaggaagag
1321attggccagc acccttcgtt ggaggagctg caggaggtgg tggtgcacaa gaagatgagg
1381cccaccatta aagatcactg gttgaaacac ccgggcctgg cccagctttg tgtgaccatc
1441gaggagtgct gggaccatga tgcagaggct cgcttgtccg cgggctgtgt ggaggagcgg
1501gtgtccctga ttcggaggtc ggtcaatggc actacctcgg actgtctcgt ttccctggtg
1561acctctgtca ccaatgtgga cctgccccct aaagagtcaa gcatcttgcc aactttcttg
1621tacaaagtgg ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa
1681tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)