Construct: ORF ccsbBroad304_15037

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018875.1_s304c1, BRDN0000459359
Derived from:
ccsbBroadEn_15037
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
SRPK3 (26576)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15037
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 26576 SRPK3 SRSF protein kinase 3 NM_001170760.2 98.1% 41.1% (many diffs)
2 human 26576 SRPK3 SRSF protein kinase 3 NM_014370.4 97.9% 41% (many diffs)
3 human 26576 SRPK3 SRSF protein kinase 3 NM_001170761.1 92.5% 43.7% (many diffs)
4 mouse 56504 Srpk3 serine/arginine-rich protei... NM_019684.2 84.3% 38.5% (many diffs)
5 mouse 56504 Srpk3 serine/arginine-rich protei... XM_006528172.3 80.7% 36.8% (many diffs)
6 mouse 56504 Srpk3 serine/arginine-rich protei... XM_017318579.1 37.4% 75.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
810
ORF length:
741
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gagcgccagc acgggcggtg gtggggacag cggcggcagc ggcggcagta
121gcagcagctc acaggcctcc tgcgggcccg agtcctcggg ctccgaacta gccctggcca
181caccggtgcc tcagatgctg cagggccttc tgggctccga cgacgaggaa caggaagacc
241ccaaagacta ctgcaagggc ggctaccacc ctgtgaagat cggcgacgtg ttcaatgggc
301ggtaccacgt ggtgcgcaaa ctgggctggg gccacttctc caccgtctgg ctctgctggg
361acatccagcg caagcgcttt gtggccctca aagtggtgaa gagtgcgggg cattacacgg
421agacagctgt ggatgagatc aagctcctga aatgtgtccg ggacagcgac cccagtgacc
481ccaaaagaga gaccattgtc cagctcattg atgacttcag gatctcagga gtcaatggag
541tccatgtgtg catggtgctg gaggtgctgg gccaccagct cctcaaatgg atcatcaagt
601ccaactacca gggcctgccc gtgccctgcg tgaagagcat cgtgaggcag gtgctgcacg
661gcctggacta cctccacacc aagtgcaaga tcatccacac ggacatcaag cccgagaaca
721tcttgctgtg tgtgggggac gcttacatca gcgcctggct gccgaggcca cggagtgcaa
781caggcagggg cgccgccccc tcccgctcat agtcagcact gccccccaga gtcttgaccg
841gtaagctgtc caaaaacaag aggaagaaga tgaggcgcaa cgggaaacag cagaagcggc
901tgctggagga gcggctgcgg gacctgcaga ggctggaggc catggaaggt gtcccacccc
961agggcgaagg attctggctt gggaattgga cgggggcagg ccggctccac atcttccttc
1021aggctgtcac ccccgggggc gccagagcca gtccctcccc aagcctcttc ctcccccngc
1081cccagggggc ggccgtagcc tcagcgcggg ctcacagacc tcaggcttct ccggctccct
1141cttctctcct gcctcctgct ccatcctctc cggctcgtcc aatcagcgag agaccggggg
1201cctcctgtcg cctagcacac cattcggtgc ctcgaacctc ctggtgaacc ccctggagcc
1261ccaaaatgca gataagatca agatcaagat cgcagacctg ggcaacgcct gctgggtgca
1321caagcacttc acggaagaca tccagactcg gcagtaccgg gccgtcgagg tgctgatcgg
1381cgccgaatac ggccccccgg cagacatctg gagcacagcc tgcatggcct tcgagctggc
1441cactggtgac tacctgttcg agccgcattc tggagaagac tacagtcgtg atgaggacca
1501catcgctcac atagtggagc ttctggggga catcccccca gccttcgccc tctcaggccg
1561ctattcccgg gagttcttca accggagagg agagctgcgg cacatccaca atctcaagca
1621ctggggcctg tacgaggtac tcatggaaaa gtacgagtgg cccctagagc aggccacaca
1681gttcagcgcc tttctgctgc ccatgatgga gtacatcccc gaaaagcggg ccagtgccgc
1741tgactgcctc cagcacccct ggctcaaccc cttgccaact ttcttgtaca aagtggttgg
1801taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag ctagcgctaa
1861ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)