Construct: ORF ccsbBroad304_15093

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015132.2_s304c1, BRDN0000459476
Derived from:
ccsbBroadEn_15093
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FGGY (55277)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15093
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350796.2 100% 100%
2 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001673.2 100% 100%
3 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448220.1 100% 100%
4 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001656.1 94.8% 94.8% 885_956del
5 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001657.2 94.8% 94.8% 885_956del
6 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001659.2 94.8% 94.8% 885_956del
7 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001660.2 94.8% 94.8% 885_956del
8 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001661.2 94.8% 94.8% 885_956del
9 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001662.2 94.8% 94.8% 885_956del
10 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001663.2 94.8% 94.8% 885_956del
11 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001664.2 94.8% 94.8% 885_956del
12 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350797.2 92.3% 88.6% (many diffs)
13 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350792.2 88.6% 88.6% 1_168del
14 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350793.2 88.6% 88.6% 1_168del
15 human 55277 FGGY FGGY carbohydrate kinase do... NM_001244714.2 88.3% 82.3% (many diffs)
16 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001668.1 87.6% 84.2% (many diffs)
17 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001669.2 87.6% 84.2% (many diffs)
18 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001670.2 87.6% 84.2% (many diffs)
19 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001671.1 87.6% 84.2% (many diffs)
20 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350799.2 86.3% 82.5% 1080_1081ins95;1137_1138ins85
21 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448185.1 84.5% 84.5% 1_168del;1053_1124del
22 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448196.1 84.5% 84.5% 1_168del;1053_1124del
23 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350795.2 84.1% 78.4% (many diffs)
24 human 55277 FGGY FGGY carbohydrate kinase do... XM_011541736.3 84.1% 78.4% (many diffs)
25 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001655.1 84.1% 78.4% (many diffs)
26 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350798.2 81.8% 78.3% 885_956del;1152_1153ins95;1209_1210ins85
27 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350791.2 79.6% 79.6% 1_336del
28 human 55277 FGGY FGGY carbohydrate kinase do... NM_018291.4 79.6% 79.6% 1_336del
29 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001645.1 79.6% 79.6% 1_336del
30 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001646.1 79.6% 79.6% 1_336del
31 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448227.1 78.1% 78.1% 0_1ins288
32 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448229.1 78.1% 78.1% 0_1ins288
33 human 55277 FGGY FGGY carbohydrate kinase do... NM_001113411.2 76.3% 76.3% 1_336del;1221_1292del
34 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350790.2 76.3% 76.3% 1_336del;1221_1292del
35 human 55277 FGGY FGGY carbohydrate kinase do... XM_011541730.1 76.3% 76.3% 1_336del;1221_1292del
36 human 55277 FGGY FGGY carbohydrate kinase do... XM_011541731.1 76.3% 76.3% 1_336del;1221_1292del
37 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001643.2 76.3% 76.3% 1_336del;1221_1292del
38 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448176.1 76.3% 76.3% 1_336del;1221_1292del
39 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001677.1 74% 74% 0_1ins288;597_668del
40 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001678.1 74% 74% 0_1ins288;597_668del
41 human 55277 FGGY FGGY carbohydrate kinase do... NM_001350794.2 68.7% 65.8% 1_336del;1416_1417ins95;1473_1474ins85
42 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001652.1 68.7% 65.8% 1_336del;1416_1417ins95;1473_1474ins85
43 human 55277 FGGY FGGY carbohydrate kinase do... XM_024448207.1 68.7% 65.8% 1_336del;1416_1417ins95;1473_1474ins85
44 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001649.1 65.9% 63.1% (many diffs)
45 human 55277 FGGY FGGY carbohydrate kinase do... XR_001737286.1 61% 1_449del;1185_1186ins148;1619_1767del
46 human 55277 FGGY FGGY carbohydrate kinase do... XR_001737285.1 60.3% 1_472del;1208_1209ins148;1642_1790del
47 human 55277 FGGY FGGY carbohydrate kinase do... XR_001737284.1 58.9% 1_517del;1253_1254ins148;1687_1835del
48 human 55277 FGGY FGGY carbohydrate kinase do... NM_001278224.2 57.4% 57.4% 0_1ins561
49 human 55277 FGGY FGGY carbohydrate kinase do... XR_001737287.1 54.1% (many diffs)
50 human 55277 FGGY FGGY carbohydrate kinase do... NR_103473.2 52.1% (many diffs)
51 human 55277 FGGY FGGY carbohydrate kinase do... XM_017001679.1 45.1% 44.6% (many diffs)
52 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503474.1 88.8% 92.7% (many diffs)
53 mouse 75578 Fggy FGGY carbohydrate kinase do... NM_001113412.1 70.7% 73.7% (many diffs)
54 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503461.3 70.7% 73.7% (many diffs)
55 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240633.2 69.7% 72.6% (many diffs)
56 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_017320432.1 69.3% 71.2% (many diffs)
57 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240636.1 64.8% 66.9% (many diffs)
58 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240635.1 64.4% 65.4% (many diffs)
59 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240637.2 64% 66.6% (many diffs)
60 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240639.2 63.9% 65.8% (many diffs)
61 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_017320430.1 60.6% 54.9% (many diffs)
62 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_017320429.1 59.8% 54.2% (many diffs)
63 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503468.3 58.1% 53.7% (many diffs)
64 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503472.3 57.9% 54.8% (many diffs)
65 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240644.1 57.5% 53.5% (many diffs)
66 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503470.3 57.1% 54% (many diffs)
67 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240643.2 57% 54.1% (many diffs)
68 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_011240645.1 52.2% 54.4% (many diffs)
69 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503476.1 51.4% 53% (many diffs)
70 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_017320431.1 51.3% 48.1% (many diffs)
71 mouse 75578 Fggy FGGY carbohydrate kinase do... XR_001784213.1 44.6% (many diffs)
72 mouse 75578 Fggy FGGY carbohydrate kinase do... NM_029347.2 43% 43.1% (many diffs)
73 mouse 75578 Fggy FGGY carbohydrate kinase do... XM_006503475.1 42.4% 42.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1383
ORF length:
1317
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtg gctggaccat cgagcagtca gtcaagttaa caggatcaat gagaccaagc
121acagtgtcct ccagtacgtc gggggggtga tgtctgtgga aatgcaggcc ccgaaacttc
181tgtggctgaa agagaacttg agagagattt gctgggataa ggcgggacat ttctttgatc
241tcccggactt cttatcgtgg aaggcaacag gtgtcacagc acggtctctc tgctccctgg
301tgtgtaagtg gacatattca gcagagaaag gctgggacga cagtttctgg aaaatgattg
361gtttggaaga ctttgttgca gataattaca gcaaaatagg aaaccaagtg ctacctcctg
421gagcttctct tggaaatggg ctcacaccag aggcagcaag agaccttggc cttctccctg
481ggattgcggt cgcagcttca ctcattgatg cccatgcagg aggactagga gtgattgggg
541cagatgtgag agggcacggc ctcatctgtg aggggcagcc agtgacgtca cggctggctg
601tcatctgtgg aacgtcttct tgtcacatgg ggatcagcaa agacccgatt tttgtaccag
661gcgtctgggg gccttatttc tcagccatgg tacctgggtt ctggctgaat gaaggtggtc
721agagcgttac tggaaaattg atagaccaca tggtacaagg ccatgctgct tttccagaac
781tacaagtaaa ggccacagcc agatgccaga gtatatatgc atatttgaac agtcacctgg
841atctgattaa gaaggctcag cctgtgggtt tccttactgt tgatttacat gtttggccag
901atttccatgg caaccggtct cccttagcag atctgacact aaagggcatg gtcaccggat
961tgaaactgtc tcaggacctt gatgatcttg ccattctcta cctggccaca gttcaagcca
1021ttgctttggg gactcgcttc attatagaag ccatggaggc agcagggcac tcaatcagta
1081ctcttttcct atgtggaggc ctcagcaaga atcccctttt tgtgcaaatg catgcggaca
1141ttactggcat gcctgtggtc ctgtcgcaag aggtggagtc cgttcttgtg ggtgctgctg
1201ttctgggtgc ctgtgcctca ggggatttcg cttctgtaca ggaagcaatg gcaaaaatga
1261gcaaagttgg gaaagttgtg ttcccgagac tacaggataa aaaatactat gataagaaat
1321accaagtatt cctgaagctg gttgaacacc agaaggagta tttggcgatc atgaatgatg
1381actgcccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
1441tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
1501tctggatta

Download FASTA (ORF) (Full)