Construct: ORF ccsbBroad304_15763

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018028.1_s304c1, BRDN0000410884
Derived from:
ccsbBroadEn_15763
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ISCU (23479)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15763
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23479 ISCU iron-sulfur cluster assembl... NM_213595.3 100% 100%
2 human 23479 ISCU iron-sulfur cluster assembl... NM_001301140.1 85.6% 85.2% (many diffs)
3 human 23479 ISCU iron-sulfur cluster assembl... NM_001320042.1 85.6% 85.2% (many diffs)
4 human 23479 ISCU iron-sulfur cluster assembl... NM_001301141.1 85.2% 82.9% (many diffs)
5 human 23479 ISCU iron-sulfur cluster assembl... NM_014301.4 83.1% 77.8% (many diffs)
6 human 23479 ISCU iron-sulfur cluster assembl... XM_011538101.2 76.6% 66.4% 339_340ins79;384_385ins38
7 human 23479 ISCU iron-sulfur cluster assembl... XM_011538100.2 69.4% 63.3% (many diffs)
8 human 23479 ISCU iron-sulfur cluster assembl... NR_135127.1 21.3% (many diffs)
9 mouse 66383 Iscu iron-sulfur cluster assembl... NM_025526.4 87.7% 95.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
567
ORF length:
501
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggcggctggg gctttccgtc tgaggcgggc ggcatcggct ctgctgctgc
121ggagcccccg cctgcccgcc cgggagctgt cggccccggc ccgactctat cacaagaagg
181ttgttgatca ttatgaaaat cctagaaacg tggggtccct tgacaagaca tctaaaaatg
241ttggaactgg actggtgggg gctccagcat gtggtgacgt aatgaaatta cagattcaag
301tggatgaaaa ggggaagatt gtggatgcta ggtttaaaac atttggctgt ggttccgcaa
361ttgcctccag ctcattagcc actgaatggg tgaaaggaaa gacggtggag gaagccttga
421ctatcaaaaa cacagatatc gccaaggagc tctgccttcc tcccgtgaaa ctgcactgct
481ccatgctggc tgaagatgca atcaaggccg ccctggctga ttacaaattg aaacaagaac
541ccaaaaaagg agaggcagag aagaaatnnc caactttctt gtacaaagtg gttggtaagc
601ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
661ggcgcgttaa gtcgacaatc aacctctgga tta

Download FASTA (ORF) (Full)