Construct: ORF ccsbBroad304_15764

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015625.1_s304c1, BRDN0000400969
Derived from:
ccsbBroadEn_15764
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RPL13A (23521)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15764
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23521 RPL13A ribosomal protein L13a NM_012423.4 99.8% 100% 387G>T
2 human 728658 RPL13AP5 ribosomal protein L13a pseu... NR_026712.1 91.9% (many diffs)
3 human 644511 RPL13AP6 ribosomal protein L13a pseu... NR_026715.1 89.1% (many diffs)
4 human 387841 RPL13AP20 ribosomal protein L13a pseu... NR_003932.2 89% (many diffs)
5 human 23521 RPL13A ribosomal protein L13a NM_001270491.1 69.7% 69.9% 0_1ins183;204G>T
6 human 23521 RPL13A ribosomal protein L13a NR_073024.1 50% (many diffs)
7 human 645683 RPL13AP3 ribosomal protein L13a pseu... NR_004844.1 32.2% (many diffs)
8 mouse 22121 Rpl13a ribosomal protein L13A NM_009438.5 88% 95.5% (many diffs)
9 mouse 100504632 Gm11478 predicted gene 11478; 60S r... XR_141061.5 77.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
675
ORF length:
609
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggaggtgcag gtcctggtgc ttgatggtcg aggccatctc ctgggccgcc
121tggcggccat cgtggctaaa caggtactgc tgggccggaa ggtggtggtc gtacgctgtg
181aaggcatcaa catttctggc aatttctaca gaaacaagtt gaagtacctg gctttcctcc
241gcaagcggat gaacaccaac ccttcccgag gcccctacca cttccgggcc cccagccgca
301tcttctggcg gaccgtgcga ggtatgctgc cccacaaaac caagcgaggc caggccgctc
361tggaccgtct caaggtgttt gacggcatcc caccgcccta cgacaagaaa aagcggatgg
421tggttcctgc tgccctcaag gtcgtgcgtc ttaagcctac aagaaagttt gcctatctgg
481ggcgcctggc tcacgaggtt ggctggaagt accaggcagt gacagccacc ctggaggaga
541agaggaaaga gaaagccaag atccactacc ggaagaagaa acagctcatg aggctacgga
601aacaggccga gaagaacgtg gagaagaaaa ttgacaaata cacagaggtc ctcaagaccc
661acggactcct ggtctnncca actttcttgt acaaagtggt tggtaagcct atccctaacc
721ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
781cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)