Construct: ORF ccsbBroadEn_01020

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002794.1_s300c1, BRDN0000457099
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MME (4311)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4311 MME membrane metalloendopeptidase NM_000902.4 100% 100%
2 human 4311 MME membrane metalloendopeptidase NM_001354642.1 100% 100%
3 human 4311 MME membrane metalloendopeptidase NM_001354643.1 100% 100%
4 human 4311 MME membrane metalloendopeptidase NM_007287.3 100% 100%
5 human 4311 MME membrane metalloendopeptidase NM_007288.3 100% 100%
6 human 4311 MME membrane metalloendopeptidase XM_006713647.4 100% 100%
7 human 4311 MME membrane metalloendopeptidase XM_011512856.2 100% 100%
8 human 4311 MME membrane metalloendopeptidase XM_011512857.2 100% 100%
9 human 4311 MME membrane metalloendopeptidase NM_001354644.1 9.8% 8.8% (many diffs)
10 mouse 17380 Mme membrane metallo endopeptidase NM_001289462.1 90.9% 94.1% (many diffs)
11 mouse 17380 Mme membrane metallo endopeptidase NM_001289463.1 90.9% 94.1% (many diffs)
12 mouse 17380 Mme membrane metallo endopeptidase NM_008604.4 90.9% 94.1% (many diffs)
13 mouse 17380 Mme membrane metallo endopeptidase XM_006501095.3 90.9% 94.1% (many diffs)
14 mouse 17380 Mme membrane metallo endopeptidase XM_006501098.3 90.9% 94.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2319
ORF length:
2250
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGGCAAGTCA GAAAGTCAGA TGGATATAAC TGATATCAAC ACTCCAAAGC
121CAAAGAAGAA ACAGCGATGG ACTCCACTGG AGATCAGCCT CTCGGTCCTT GTCCTGCTCC
181TCACCATCAT AGCTGTGACA ATGATCGCAC TCTATGCAAC CTACGATGAT GGTATTTGCA
241AGTCATCAGA CTGCATAAAA TCAGCTGCTC GACTGATCCA AAACATGGAT GCCACCACTG
301AGCCTTGTAC AGACTTTTTC AAATATGCTT GCGGAGGCTG GTTGAAACGT AATGTCATTC
361CCGAGACCAG CTCCCGTTAC GGCAACTTTG ACATTTTAAG AGATGAACTA GAAGTCGTTT
421TGAAAGATGT CCTTCAAGAA CCCAAAACTG AAGATATAGT AGCAGTGCAG AAAGCAAAAG
481CATTGTACAG GTCTTGTATA AATGAATCTG CTATTGATAG CAGAGGTGGA GAACCTCTAC
541TCAAACTGTT ACCAGACATA TATGGGTGGC CAGTAGCAAC AGAAAACTGG GAGCAAAAAT
601ATGGTGCTTC TTGGACAGCT GAAAAAGCTA TTGCACAACT GAATTCTAAA TATGGGAAAA
661AAGTCCTTAT TAATTTGTTT GTTGGCACTG ATGATAAGAA TTCTGTGAAT CATGTAATTC
721ATATTGACCA ACCTCGACTT GGCCTCCCTT CTAGAGATTA CTATGAATGC ACTGGAATCT
781ATAAAGAGGC TTGTACAGCA TATGTGGATT TTATGATTTC TGTGGCCAGA TTGATTCGTC
841AGGAAGAAAG ATTGCCCATC GATGAAAACC AGCTTGCTTT GGAAATGAAT AAAGTTATGG
901AATTGGAAAA AGAAATTGCC AATGCTACGG CTAAACCTGA AGATCGAAAT GATCCAATGC
961TTCTGTATAA CAAGATGACA TTGGCCCAGA TCCAAAATAA CTTTTCACTA GAGATCAATG
1021GGAAGCCATT CAGCTGGTTG AATTTCACAA ATGAAATCAT GTCAACTGTG AATATTAGTA
1081TTACAAATGA GGAAGATGTG GTTGTTTATG CTCCAGAATA TTTAACCAAA CTTAAGCCCA
1141TTCTTACCAA ATATTCTGCC AGAGATCTTC AAAATTTAAT GTCCTGGAGA TTCATAATGG
1201ATCTTGTAAG CAGCCTCAGC CGAACCTACA AGGAGTCCAG AAATGCTTTC CGCAAGGCCC
1261TTTATGGTAC AACCTCAGAA ACAGCAACTT GGAGACGTTG TGCAAACTAT GTCAATGGGA
1321ATATGGAAAA TGCTGTGGGG AGGCTTTATG TGGAAGCAGC ATTTGCTGGA GAGAGTAAAC
1381ATGTGGTCGA GGATTTGATT GCACAGATCC GAGAAGTTTT TATTCAGACT TTAGATGACC
1441TCACTTGGAT GGATGCCGAG ACAAAAAAGA GAGCTGAAGA AAAGGCCTTA GCAATTAAAG
1501AAAGGATCGG CTATCCTGAT GACATTGTTT CAAATGATAA CAAACTGAAT AATGAGTACC
1561TCGAGTTGAA CTACAAAGAA GATGAATACT TCGAGAACAT AATTCAAAAT TTGAAATTCA
1621GCCAAAGTAA ACAACTGAAG AAGCTCCGAG AAAAGGTGGA CAAAGATGAG TGGATAAGTG
1681GAGCAGCTGT AGTCAATGCA TTTTACTCTT CAGGAAGAAA TCAGATAGTC TTCCCAGCCG
1741GCATTCTGCA GCCCCCCTTC TTTAGTGCCC AGCAGTCCAA CTCATTGAAC TATGGGGGCA
1801TCGGCATGGT CATAGGACAC GAAATCACCC ATGGCTTCGA TGACAATGGC AGAAACTTTA
1861ACAAAGATGG AGACCTCGTT GACTGGTGGA CTCAACAGTC TGCAAGTAAC TTTAAGGAGC
1921AATCCCAGTG CATGGTGTAT CAGTATGGAA ACTTTTCCTG GGACCTGGCA GGTGGACAGC
1981ACCTTAATGG AATTAATACA CTGGGAGAAA ACATTGCTGA TAATGGAGGT CTTGGTCAAG
2041CATACAGAGC CTATCAGAAT TATATTAAAA AGAATGGCGA AGAAAAATTA CTTCCTGGAC
2101TTGACCTAAA TCACAAACAA CTATTTTTCT TGAACTTTGC ACAGGTGTGG TGTGGAACCT
2161ATAGGCCAGA GTATGCGGTT AACTCCATTA AAACAGATGT GCACAGTCCA GGCAATTTCA
2221GGATTATTGG GACTTTGCAG AACTCTGCAG AGTTTTCAGA AGCCTTTCAC TGCCGCAAGA
2281ATTCATACAT GAATCCAGAA AAGAAGTGCC GGGTTTGGTT GCCAACTTTC TTGTACAAAG
2341TTGGcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)