Construct: ORF ccsbBroadEn_01492

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003423.1_s300c1, BRDN0000389914
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SCNN1G (6340)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6340 SCNN1G sodium channel epithelial 1... NM_001039.4 100% 100%
2 mouse 20278 Scnn1g sodium channel, nonvoltage-... NM_011326.3 83.8% 85.4% (many diffs)
3 mouse 20278 Scnn1g sodium channel, nonvoltage-... XM_006507477.4 66.5% 67.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2013
ORF length:
1947
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC ACCCGGAGAG AAGATCAAAG CCAAAATCAA GAAGAATCTG CCCGTGACGG
121GCCCTCAGGC GCCGACCATT AAAGAGCTGA TGCGGTGGTA CTGCCTCAAC ACCAACACCC
181ATGGCTGTCG CCGCATCGTG GTGTCCCGCG GCCGTCTGCG CCGCCTCCTC TGGATCGGGT
241TCACACTGAC TGCCGTGGCC CTCATCCTCT GGCAGTGCGC CCTCCTCGTC TTCTCCTTCT
301ATACTGTCTC AGTTTCCATC AAAGTCCACT TCCGGAAGCT GGATTTTCCT GCAGTCACCA
361TCTGCAACAT CAACCCCTAC AAGTACAGCA CCGTTCGCCA CCTTCTAGCT GACTTGGAAC
421AGGAGACCAG AGAGGCCCTG AAGTCCCTGT ATGGCTTTCC AGAGTCCCGG AAGCGCCGAG
481AGGCGGAGTC CTGGAACTCC GTCTCAGAGG GAAAGCAGCC TAGATTCTCC CACCGGATTC
541CGCTGCTGAT CTTTGATCAG GATGAGAAGG GCAAGGCCAG GGACTTCTTC ACAGGGAGGA
601AGCGGAAAGT CGGCGGTAGC ATCATTCACA AGGCTTCAAA TGTCATGCAC ATCGAGTCCA
661AGCAAGTGGT GGGATTCCAA CTGTGCTCAA ATGACACCTC CGACTGTGCC ACCTACACCT
721TCAGCTCGGG AATCAATGCC ATTCAGGAGT GGTATAAGCT ACACTACATG AACATCATGG
781CACAGGTGCC TCTGGAGAAG AAAATCAACA TGAGCTATTC TGCTGAGGAG CTGCTGGTGA
841CCTGCTTCTT TGATGGAGTG TCCTGTGATG CCAGGAATTT CACGCTTTTC CACCACCCGA
901TGCATGGGAA TTGCTATACT TTCAACAACA GAGAAAATGA GACCATTCTC AGCACCTCCA
961TGGGGGGCAG CGAATATGGG CTGCAAGTCA TTTTGTACAT AAACGAAGAG GAATACAACC
1021CATTCCTCGT GTCCTCCACT GGAGCTAAGG TGATCATCCA TCGGCAGGAT GAGTATCCCT
1081TCGTCGAAGA TGTGGGAACA GAGATTGAGA CAGCAATGGT CACCTCTATA GGAATGCACC
1141TGACAGAGTC CTTCAAGCTG AGTGAGCCCT ACAGTCAGTG CACGGAGGAC GGGAGTGACG
1201TGCCAATCAG GAACATCTAC AACGCTGCCT ACTCGCTCCA GATCTGCCTT CATTCATGCT
1261TCCAGACAAA GATGGTGGAG AAATGTGGGT GTGCCCAGTA CAGCCAGCCT CTACCTCCTG
1321CAGCCAACTA CTGCAACTAC CAGCAGCACC CCAACTGGAT GTATTGTTAC TACCAACTGC
1381ATCGAGCCTT TGTCCAGGAA GAGCTGGGCT GCCAGTCTGT GTGCAAGGAA GCCTGCAGCT
1441TTAAAGAGTG GACACTAACC ACAAGCCTGG CACAATGGCC ATCTGTGGTT TCGGAGAAGT
1501GGTTGCTGCC TGTTCTCACT TGGGACCAAG GCCGGCAAGT AAACAAAAAG CTCAACAAGA
1561CAGACTTGGC CAAACTCTTG ATATTCTACA AAGACCTGAA CCAGAGATCC ATCATGGAGA
1621GCCCAGCCAA CAGTATTGAG ATGCTTCTGT CCAACTTCGG TGGCCAGCTG GGCCTGTGGA
1681TGAGCTGCTC TGTTGTCTGC GTCATCGAGA TCATCGAGGT CTTCTTCATT GACTTCTTCT
1741CTATCATTGC CCGCCGCCAG TGGCAGAAAG CCAAGGAGTG GTGGGCCTGG AAACAGGCTC
1801CCCCATGTCC AGAAGCTCCC CGTAGCCCAC AGGGCCAGGA CAATCCAGCC CTGGATATAG
1861ACGATGACCT ACCCACTTTC AACTCTGCTT TGCACCTGCC TCCAGCCCTA GGAACCCAAG
1921TGCCCGGCAC ACCGCCCCCC AAATACAATA CCTTGCGCTT GGAGAGGGCC TTTTCCAACC
1981AGCTCACAGA TACCCAGATG CTGGATGAGC TCTGCCCAAC TTTCTTGTAC AAAGTtggca
2041ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)