Construct: ORF ccsbBroadEn_01651

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001294.1_s300c1, BRDN0000456434
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TCF7L2 (6934)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6934 TCF7L2 transcription factor 7 like 2 NM_001146284.2 100% 100%
2 human 6934 TCF7L2 transcription factor 7 like 2 NM_001198529.2 99.1% 99.1% 708_719del
3 human 6934 TCF7L2 transcription factor 7 like 2 NM_001146286.2 95.4% 95.4% 708_719del;1248_1249ins51
4 human 6934 TCF7L2 transcription factor 7 like 2 NM_001198527.2 94.9% 92.1% (many diffs)
5 human 6934 TCF7L2 transcription factor 7 like 2 NM_001363501.1 94.3% 94.3% 382_450del;777_788del
6 human 6934 TCF7L2 transcription factor 7 like 2 NM_001198528.2 94.1% 91.3% (many diffs)
7 human 6934 TCF7L2 transcription factor 7 like 2 NM_001198525.2 92.5% 88.1% (many diffs)
8 human 6934 TCF7L2 transcription factor 7 like 2 NM_001198531.2 90.8% 90.8% 382_450del;777_788del;1317_1318ins51
9 human 6934 TCF7L2 transcription factor 7 like 2 NM_001198530.1 88% 88% 380_381ins102;606_617del;1146_1147ins51
10 human 6934 TCF7L2 transcription factor 7 like 2 NM_001146283.2 86.5% 86.5% 484_624del;849_860del;1389_1390ins51
11 human 6934 TCF7L2 transcription factor 7 like 2 NM_001146285.1 77.3% 71.3% (many diffs)
12 human 6934 TCF7L2 transcription factor 7 like 2 NM_001198526.2 77.2% 71.2% (many diffs)
13 human 6934 TCF7L2 transcription factor 7 like 2 NM_030756.5 76.3% 70.8% 708_719del;1298_1370del;1451_1788del
14 human 6934 TCF7L2 transcription factor 7 like 2 NM_001146274.2 74.2% 68.5% (many diffs)
15 human 6934 TCF7L2 transcription factor 7 like 2 NM_001367943.1 73.5% 68.2% (many diffs)
16 human 6934 TCF7L2 transcription factor 7 like 2 NM_001349870.2 65.4% 58.4% (many diffs)
17 human 6934 TCF7L2 transcription factor 7 like 2 NM_001349871.1 59.9% 57.3% (many diffs)
18 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331143.1 92% 99.5% (many diffs)
19 mouse 21416 Tcf7l2 transcription factor 7 like... NM_009333.4 91.2% 98.6% (many diffs)
20 mouse 21416 Tcf7l2 transcription factor 7 like... XM_006526888.3 90.2% 97.6% (many diffs)
21 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001142923.2 87.6% 94.9% (many diffs)
22 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331135.1 87.5% 94.7% (many diffs)
23 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331142.1 87.2% 91.7% (many diffs)
24 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331149.1 86.8% 93.9% (many diffs)
25 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001142921.2 86.7% 93.9% (many diffs)
26 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318123.1 86.7% 89.4% (many diffs)
27 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001142918.2 86.4% 90.9% (many diffs)
28 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331145.1 86.3% 88.6% (many diffs)
29 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318127.1 86.3% 90.7% (many diffs)
30 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331137.1 85.9% 88.6% (many diffs)
31 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318117.1 85.9% 93% (many diffs)
32 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331136.1 85.5% 89.9% (many diffs)
33 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001142919.2 85.5% 87.9% (many diffs)
34 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318121.1 85% 87.7% (many diffs)
35 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331144.1 84.8% 88.1% (many diffs)
36 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318131.1 84.6% 87% (many diffs)
37 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318129.1 84.1% 87.3% (many diffs)
38 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318119.1 83.1% 87.4% (many diffs)
39 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318115.1 82.6% 85.3% (many diffs)
40 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331148.1 82.4% 86.7% (many diffs)
41 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318126.1 82.1% 84.5% (many diffs)
42 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318114.1 82% 84.6% (many diffs)
43 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318116.1 81.6% 85.8% (many diffs)
44 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331150.1 81.5% 83.8% (many diffs)
45 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001142920.2 77.2% 82.4% (many diffs)
46 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331141.1 71.2% 71.2% (many diffs)
47 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331139.1 70.8% 70.7% (many diffs)
48 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331140.1 70.4% 70.7% (many diffs)
49 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001142922.2 70% 70.3% (many diffs)
50 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318112.1 69.8% 70.1% (many diffs)
51 mouse 21416 Tcf7l2 transcription factor 7 like... XM_006526866.3 69.4% 69.7% (many diffs)
52 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331147.1 68.1% 68.1% (many diffs)
53 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331138.1 67.8% 68.1% (many diffs)
54 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318110.1 67.5% 67.5% (many diffs)
55 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001331146.1 67.4% 67.7% (many diffs)
56 mouse 21416 Tcf7l2 transcription factor 7 like... XM_006526861.3 67.3% 67.6% (many diffs)
57 mouse 21416 Tcf7l2 transcription factor 7 like... XM_006526860.3 66.8% 67.2% (many diffs)
58 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318135.1 54.8% 57.8% (many diffs)
59 mouse 21416 Tcf7l2 transcription factor 7 like... NM_001142924.2 54.3% 57.3% (many diffs)
60 mouse 21416 Tcf7l2 transcription factor 7 like... XM_006526897.3 44.8% 44.3% (many diffs)
61 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318132.1 44.8% 44.3% (many diffs)
62 mouse 21416 Tcf7l2 transcription factor 7 like... XM_006526894.3 44.4% 44% (many diffs)
63 mouse 21416 Tcf7l2 transcription factor 7 like... XM_006526895.3 44.4% 44% (many diffs)
64 mouse 21416 Tcf7l2 transcription factor 7 like... XR_001782573.1 33% (many diffs)
65 mouse 21416 Tcf7l2 transcription factor 7 like... XR_001782572.1 32.7% (many diffs)
66 mouse 21416 Tcf7l2 transcription factor 7 like... XR_001782576.1 29.7% (many diffs)
67 mouse 21416 Tcf7l2 transcription factor 7 like... NR_138565.1 29.7% (many diffs)
68 mouse 21416 Tcf7l2 transcription factor 7 like... XM_017318134.1 29.7% 27.9% (many diffs)
69 mouse 21416 Tcf7l2 transcription factor 7 like... XR_386455.3 29.4% (many diffs)
70 mouse 21416 Tcf7l2 transcription factor 7 like... XR_001782574.1 29.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1431
ORF length:
1365
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC GCAGCTGAAC GGCGGTGGAG GGGATGACCT AGGCGCCAAC GACGAACTGA
121TTTCCTTCAA AGACGAGGGC GAACAGGAGG AGAAGAGCTC CGAAAACTCC TCGGCAGAGA
181GGGATTTAGC TGATGTCAAA TCGTCTCTAG TCAATGAATC AGAAACGAAT CAAAACAGCT
241CCTCCGATTC CGAGGCGGAA AGACGGCCTC CGCCTCGCTC CGAAAGTTTC CGAGACAAAT
301CCCGGGAAAG TTTGGAAGAA GCGGCCAAGA GGCAAGATGG AGGGCTCTTT AAGGGGCCAC
361CGTATCCCGG CTACCCCTTC ATCATGATCC CCGACCTGAC GAGCCCCTAC CTCCCCAACG
421GATCGCTCTC GCCCACCGCC CGAACCTATC TCCAGATGAA ATGGCCACTG CTTGATGTCC
481AGGCAGGGAG CCTCCAGAGT AGACAAGCCC TCAAGGATGC CCGGTCCCCA TCACCGGCAC
541ACATTGTCTC TAACAAAGTG CCAGTGGTGC AGCACCCTCA CCATGTCCAC CCCCTCACGC
601CTCTTATCAC GTACAGCAAT GAACACTTCA CGCCGGGAAA CCCACCTCCA CACTTACCAG
661CCGACGTAGA CCCCAAAACA GGAATCCCAC GGCCTCCGCA CCCTCCAGAT ATATCCCCGT
721ATTACCCACT ATCGCCTGGC ACCGTAGGAC AAATCCCCCA TCCGCTAGGA TGGCAAGGTC
781AACCAGTGTA CCCAATCACG ACAGGAGGAT TCAGACACCC CTACCCCACA GCTCTGACCG
841TCAATGCTTC CATGTCCAGG TTCCCTCCCC ATATGGTCCC ACCACATCAT ACGCTACACA
901CGACGGGCAT TCCGCATCCG GCCATAGTCA CACCAACAGT CAAACAGGAA TCGTCCCAGA
961GTGATGTCGG CTCACTCCAT AGTTCAAAGC ATCAGGACTC CAAAAAGGAA GAAGAAAAGA
1021AGAAGCCCCA CATAAAGAAA CCTCTTAATG CATTCATGTT GTATATGAAG GAAATGAGAG
1081CAAAGGTCGT AGCTGAGTGC ACGTTGAAAG AAAGCGCGGC CATCAACCAG ATCCTTGGGC
1141GGAGGTGGCA TGCACTGTCC AGAGAAGAGC AAGCGAAATA CTACGAGCTG GCCCGGAAGG
1201AGCGACAGCT TCATATGCAA CTGTACCCCG GCTGGTCCGC GCGGGATAAC TATGGAAAGA
1261AGAAGAAGAG GAAAAGGGAC AAGCAGCCGG GAGAGACCAA TGAACACAGC GAATGTTTCC
1321TAAATCCTTG CCTTTCACTT CCTCCGATTA CAGGAGAAAA AAAAAGTGCG TTCGCTACAT
1381ACAAGGTGAA GGCAGCTGCC TCAGCCCACC CTCTTCAGAT GGAAGCTTAC TACCCAACTT
1441TCTTGTACAA AGTTGGcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)

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