Construct: ORF ccsbBroadEn_01774

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010715.1_s300c1, BRDN0000392795
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WARS1 (7453)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 NM_004184.4 100% 100%
2 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 NM_173701.2 100% 100%
3 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 XM_005268044.4 100% 100%
4 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 XM_006720249.3 100% 100%
5 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 XM_011537133.2 100% 100%
6 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 XM_017021627.2 100% 100%
7 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 XM_017021629.1 100% 100%
8 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 XM_024449706.1 100% 100%
9 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 XM_024449707.1 100% 100%
10 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 NM_213645.2 91.2% 91.2% 0_1ins123
11 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 NM_213646.2 91.2% 91.2% 0_1ins123
12 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 XM_011537136.3 91.2% 91.2% 0_1ins123
13 human 7453 WARS1 tryptophanyl-tRNA synthetase 1 XM_024449708.1 91.2% 91.2% 0_1ins123
14 mouse 22375 Wars tryptophanyl-tRNA synthetase NM_001164314.1 86.5% 89.4% (many diffs)
15 mouse 22375 Wars tryptophanyl-tRNA synthetase NM_001164488.1 86.5% 89.4% (many diffs)
16 mouse 22375 Wars tryptophanyl-tRNA synthetase NM_011710.3 85.4% 88.3% (many diffs)
17 mouse 22375 Wars tryptophanyl-tRNA synthetase XM_006515819.1 85.4% 88.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1479
ORF length:
1413
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC CAACAGTGAG CCCGCATCTC TGCTGGAGCT GTTCAACAGC ATCGCCACAC
121AAGGGGAGCT CGTAAGGTCC CTCAAAGCGG GAAATGCGTC AAAGGATGAA ATTGATTCTG
181CAGTAAAGAT GTTGGTGTCA TTAAAAATGA GCTACAAAGC TGCCGCGGGG GAGGATTACA
241AGGCTGACTG TCCTCCAGGG AACCCAGCAC CTACCAGTAA TCATGGCCCA GATGCCACAG
301AAGCTGAAGA GGATTTTGTG GACCCATGGA CAGTACAGAC AAGCAGTGCA AAAGGCATAG
361ACTACGATAA GCTCATTGTT CGGTTTGGAA GTAGTAAAAT TGACAAAGAG CTAATAAACC
421GAATAGAGAG AGCCACCGGC CAAAGACCAC ACCACTTCCT GCGCAGAGGC ATCTTCTTCT
481CACACAGAGA TATGAATCAG GTTCTTGATG CCTATGAAAA TAAGAAGCCA TTTTATCTGT
541ACACGGGCCG GGGCCCCTCT TCTGAAGCAA TGCATGTAGG TCACCTCATT CCATTTATTT
601TCACAAAGTG GCTCCAGGAT GTATTTAACG TGCCCTTGGT CATCCAGATG ACGGATGACG
661AGAAGTATCT GTGGAAGGAC CTGACCCTGG ACCAGGCCTA TAGCTATGCT GTGGAGAATG
721CCAAGGACAT CATCGCCTGT GGCTTTGACA TCAACAAGAC TTTCATATTC TCTGACCTGG
781ACTACATGGG GATGAGCTCA GGTTTCTACA AAAATGTGGT GAAGATTCAA AAGCATGTTA
841CCTTCAACCA AGTGAAAGGC ATTTTCGGCT TCACTGACAG CGACTGCATT GGGAAGATCA
901GTTTTCCTGC CATCCAGGCT GCTCCCTCCT TCAGCAACTC ATTCCCACAG ATCTTCCGAG
961ACAGGACGGA TATCCAGTGC CTTATCCCAT GTGCCATTGA CCAGGATCCT TACTTTAGAA
1021TGACAAGGGA CGTCGCCCCC AGGATCGGCT ATCCTAAACC AGCCCTGCTG CACTCCACCT
1081TCTTCCCAGC CCTGCAGGGC GCCCAGACCA AAATGAGTGC CAGCGACCCC AACTCCTCCA
1141TCTTCCTCAC CGACACGGCC AAGCAGATCA AAACCAAGGT CAATAAGCAT GCGTTTTCTG
1201GAGGGAGAGA CACCATCGAG GAGCACAGGC AGTTTGGGGG CAACTGTGAT GTGGACGTGT
1261CTTTCATGTA CCTGACCTTC TTCCTCGAGG ACGACGACAA GCTCGAGCAG ATCAGGAAGG
1321ATTACACCAG CGGAGCCATG CTCACCGGTG AGCTCAAGAA GGCACTCATA GAGGTTCTGC
1381AGCCCTTGAT CGCAGAGCAC CAGGCCCGGC GCAAGGAGGT CACGGATGAG ATAGTGAAAG
1441AGTTCATGAC TCCCCGGAAG CTGTCCTTCG ACTTTCAGTA CCCAACTTTC TTGTACAAAG
1501Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)

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