Construct: ORF ccsbBroadEn_01778

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000401.1_s300c1, BRDN0000396533
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WNT2 (7472)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7472 WNT2 Wnt family member 2 NM_003391.3 100% 100%
2 human 7472 WNT2 Wnt family member 2 NR_024047.2 26.3% 1_69del;379_380ins64;1086_3792del
3 mouse 22413 Wnt2 wingless-type MMTV integrat... NM_023653.5 91.7% 96.3% (many diffs)
4 mouse 22413 Wnt2 wingless-type MMTV integrat... XM_006505045.2 82.4% 85.6% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1146
ORF length:
1080
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA CGCCCCTCTC GGTGGAATCT GGCTCTGGCT CCCTCTGCTC TTGACCTGGC
121TCACCCCCGA GGTCAACTCT TCATGGTGGT ACATGAGAGC TACAGGTGGC TCCTCCAGGG
181TGATGTGCGA TAATGTGCCA GGCCTGGTGA GCAGCCAGCG GCAGCTGTGT CACCGACATC
241CAGATGTGAT GCGTGCCATT AGCCAGGGCG TGGCCGAGTG GACAGCAGAA TGCCAGCACC
301AGTTCCGCCA GCACCGCTGG AATTGCAACA CCCTGGACAG GGATCACAGC CTTTTTGGCA
361GGGTCCTACT CCGAAGTAGT CGGGAATCTG CCTTTGTTTA TGCCATCTCC TCAGCTGGAG
421TTGTATTTGC CATCACCAGG GCCTGTAGCC AAGGAGAAGT AAAATCCTGT TCCTGTGATC
481CAAAGAAGAT GGGAAGCGCC AAGGACAGCA AAGGCATTTT TGATTGGGGT GGCTGCAGTG
541ATAACATTGA CTATGGGATC AAATTTGCCC GCGCATTTGT GGATGCAAAG GAAAGGAAAG
601GAAAGGATGC CAGAGCCCTG ATGAATCTTC ACAACAACAG AGCTGGCAGG AAGGCTGTAA
661AGCGGTTCTT GAAACAAGAG TGCAAGTGCC ACGGGGTGAG CGGCTCATGT ACTCTCAGGA
721CATGCTGGCT GGCCATGGCC GACTTCAGGA AAACGGGCGA TTATCTCTGG AGGAAGTACA
781ATGGGGCCAT CCAGGTGGTC ATGAACCAGG ATGGCACAGG TTTCACTGTG GCTAACGAGA
841GGTTTAAGAA GCCAACGAAA AATGACCTCG TGTATTTTGA GAATTCTCCA GACTACTGTA
901TCAGGGACCG AGAGGCAGGC TCCCTGGGTA CAGCAGGCCG TGTGTGCAAC CTGACTTCCC
961GGGGCATGGA CAGCTGTGAA GTCATGTGCT GTGGGAGAGG CTACGACACC TCCCATGTCA
1021CCCGGATGAC CAAGTGTGGG TGTAAGTTCC ACTGGTGCTG CGCCGTGCGC TGTCAGGACT
1081GCCTGGAAGC TCTGGATGTG CACACATGCA AGGCCCCCAA GAACGCTGAC TGGACAACCG
1141CTACATGCCC AACTTTCTTG TACAAAGTtg gcattataag aaagcattgc ttatcaattt
1201gttgcaacga ac

Download FASTA (ORF) (Full)