Construct: ORF ccsbBroadEn_02425

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005861.1_s300c1, BRDN0000385649
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDIPT (10423)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10423 CDIPT CDP-diacylglycerol--inosito... NM_006319.5 100% 100%
2 human 10423 CDIPT CDP-diacylglycerol--inosito... NM_001286585.2 78.8% 78.8% 42_43ins135
3 human 10423 CDIPT CDP-diacylglycerol--inosito... XM_005255038.4 78.8% 70.8% (many diffs)
4 human 10423 CDIPT CDP-diacylglycerol--inosito... NM_001286586.2 69.4% 69.4% 0_1ins195
5 mouse 52858 Cdipt CDP-diacylglycerol--inosito... NM_026638.3 89.5% 96.2% (many diffs)
6 mouse 52858 Cdipt CDP-diacylglycerol--inosito... XM_006508022.2 86.6% 93.1% (many diffs)
7 mouse 52858 Cdipt CDP-diacylglycerol--inosito... NM_001347656.1 67.8% 64.6% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
705
ORF length:
639
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC AGACGAAAAT ATCTTCCTGT TCGTGCCCAA CCTCATCGGT TATGCCCGGA
121TTGTCTTCGC CATCATTTCT TTCTACTTCA TGCCCTGCTG CCCCCTCACG GCCTCCTCCT
181TCTACCTGCT CAGCGGCCTG CTGGACGCTT TCGATGGACA CGCTGCTCGC GCTCTTAATC
241AAGGAACCCG GTTTGGGGCC ATGCTGGACA TGCTGACGGA CCGCTGCTCC ACCATGTGCC
301TGTTGGTCAA CCTGGCCCTG CTGTACCCTG GAGCCACGCT GTTCTTCCAA ATCAGCATGA
361GTTTGGATGT GGCCAGTCAC TGGCTGCACC TCCACAGTTC TGTGGTCCGA GGCAGTGAGA
421GTCACAAGAT GATCGACTTG TCCGGGAATC CGGTGCTTCG GATCTACTAC ACCTCGAGGC
481CTGCTCTGTT CACCTTGTGT GCTGGGAATG AGCTCTTCTA CTGCCTCCTC TACCTGTTCC
541ATTTCTCTGA GGGACCTTTA GTTGGCTCTG TGGGACTGTT CCGGATGGGC CTCTGGGTCA
601CTGCCCCCAT CGCCTTGCTG AAGTCGCTCA TCAGCGTCAT CCACCTGATC ACGGCCGCCC
661GCAACATGGC TGCCCTGGAC GCAGCAGACC GCGCCAAGAA GAAGTGCCCA ACTTTCTTGT
721ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)