Construct: ORF ccsbBroadEn_03184

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010300.1_s300c1, BRDN0000456295
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ST8SIA3 (51046)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51046 ST8SIA3 ST8 alpha-N-acetyl-neuramin... NM_015879.3 100% 100%
2 mouse 20451 St8sia3 ST8 alpha-N-acetyl-neuramin... NM_009182.3 92.2% 97.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1209
ORF length:
1140
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAGAAACTGC AAAATGGCCC GGGTCGCCAG TGTGCTGGGG CTGGTCATGC
121TCAGCGTCGC CCTGCTGATT TTATCGCTCA TCAGCTACGT GTCCCTGAAA AAGGAGAACA
181TCTTCACCAC TCCCAAGTAC GCCAGCCCGG GGGCGCCCCG AATGTACATG TTCCACGCGG
241GATTCCGGTC ACAATTTGCG CTGAAGTTTC TAGACCCGTC ATTCGTGCCC ATTACGAATT
301CTCTCACCCA GGAACTCCAA GAGAAACCTT CTAAGTGGAA ATTTAATCGG ACAGCGTTTT
361TACATCAAAG GCAAGAAATT CTTCAGCATG TCGATGTAAT AAAAAATTTT TCTTTGACCA
421AGAATAGTGT TCGGATTGGA CAACTGATGC ACTATGATTA TTCCAGCCAT AAATATGTTT
481TCTCTATTAG CAATAACTTC CGGTCACTTC TTCCAGATGT GTCACCCATT ATGAACAAGC
541ATTATAATAT TTGTGCTGTG GTTGGAAATA GTGGGATCCT GACAGGGAGC CAGTGTGGAC
601AAGAAATAGA TAAATCAGAT TTTGTTTTCC GTTGCAATTT CGCCCCTACG GAGGCTTTCC
661AAAGAGATGT TGGAAGAAAA ACCAATCTTA CCACCTTCAA CCCCAGCATC CTGGAAAAAT
721ATTACAACAA TCTCTTGACT ATTCAGGACC GTAACAACTT TTTCCTCAGT TTAAAAAAGC
781TTGACGGGGC CATTCTTTGG ATCCCTGCAT TTTTCTTCCA CACTTCAGCA ACTGTGACCA
841GGACATTAGT TGACTTTTTT GTTGAACACA GAGGTCAGTT AAAAGTCCAA CTGGCTTGGC
901CGGGAAATAT AATGCAACAT GTCAACAGGT ACTGGAAAAA CAAACATTTG TCACCTAAAC
961GGCTGAGCAC AGGTATTCTT ATGTACACCC TTGCATCAGC AATATGTGAA GAGATCCACT
1021TGTATGGATT TTGGCCGTTT GGATTTGACC CCAACACAAG GGAAGATCTT CCATACCATT
1081ACTATGACAA AAAAGGAACC AAATTTACCA CCAAGTGGCA GGAGTCCCAC CAGCTGCCTG
1141CTGAGTTTCA GCTGCTGTAC CGAATGCATG GGGAAGGGCT CACCAAGCTG ACTCTGTCAC
1201ACTGTGCCTT GCCAACTTTC TTGTACAAAG TTGGcattat aagaaagcat tgcttatcaa
1261tttgttgcaa cgaac

Download FASTA (ORF) (Full)