Construct: ORF ccsbBroadEn_03359

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007994.1_s300c1, BRDN0000388206
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FKBP7 (51661)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51661 FKBP7 FKBP prolyl isomerase 7 NM_181342.3 100% 100%
2 human 51661 FKBP7 FKBP prolyl isomerase 7 NM_001135212.2 99.5% 99.5% 372_373insGCA
3 human 51661 FKBP7 FKBP prolyl isomerase 7 XM_011511348.3 51.8% 44% 0_1ins169;51_52ins152
4 human 51661 FKBP7 FKBP prolyl isomerase 7 XM_011511349.3 51.3% 44.1% 0_1ins169;47_48ins155
5 human 51661 FKBP7 FKBP prolyl isomerase 7 XM_005246638.5 49.2% 45.8% 1_144del;516_517ins134;543_544ins133
6 mouse 14231 Fkbp7 FK506 binding protein 7 NM_010222.2 83.7% 85.5% (many diffs)
7 mouse 14231 Fkbp7 FK506 binding protein 7 XM_006498749.2 83.2% 85.1% (many diffs)
8 mouse 14231 Fkbp7 FK506 binding protein 7 XR_374406.3 44% (many diffs)
9 mouse 14231 Fkbp7 FK506 binding protein 7 XR_374407.3 43.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
732
ORF length:
666
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC AAAAACCATG CATTTCTTAT TCAGATTCAT TGTTTTCTTT TATCTGTGGG
121GCCTTTTTAC TGCTCAGAGA CAAAAGAAAG AGGAGAGCAC CGAAGAAGTG AAAATAGAAG
181TTTTGCATCG TCCAGAAAAC TGCTCTAAGA CAAGCAAGAA GGGAGACCTA CTAAATGCCC
241ATTATGACGG CTACCTGGCT AAAGACGGCT CGAAATTCTA CTGCAGCCGG ACACAAAATG
301AAGGCCACCC CAAATGGTTT GTTCTTGGTG TTGGGCAAGT CATAAAAGGC CTAGACATTG
361CTATGACAGA TATGTGCCCT GGAGAAAAGC GAAAAGTAGT TATACCCCCT TCATTTGCAT
421ACGGAAAGGA AGGCTATGCA GAAGGCAAGA TTCCACCGGA TGCTACATTG ATTTTTGAGA
481TTGAACTTTA TGCTGTGACC AAAGGACCAC GGAGCATTGA GACATTTAAA CAAATAGACA
541TGGACAATGA CAGGCAGCTC TCTAAAGCCG AGATAAACCT CTACTTGCAA AGGGAATTTG
601AAAAAGATGA GAAGCCACGT GACAAGTCAT ATCAGGATGC AGTTTTAGAA GATATTTTTA
661AGAAGAATGA CCATGATGGT GATGGCTTCA TTTCTCCCAA GGAATACAAT GTATACCAAC
721ACGATGAACT ATACCCAACT TTCTTGTACA AAGTtggcat tataagaaag cattgcttat
781caatttgttg caacgaac

Download FASTA (ORF) (Full)

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