Construct: ORF ccsbBroadEn_03554

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001058.1_s300c1, BRDN0000393328
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NAT10 (55226)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55226 NAT10 N-acetyltransferase 10 NM_024662.3 99.9% 99.9% 1381T>C;1686C>T
2 human 55226 NAT10 N-acetyltransferase 10 NM_001144030.2 92.9% 92.8% 0_1ins216;1165T>C;1470C>T
3 mouse 98956 Nat10 N-acetyltransferase 10 NM_153126.2 88.8% 95.5% (many diffs)
4 mouse 98956 Nat10 N-acetyltransferase 10 XM_006500455.3 76.6% 80.7% (many diffs)
5 mouse 98956 Nat10 N-acetyltransferase 10 XR_374547.3 47.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3141
ORF length:
3075
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCA TCGGAAAAAG GTGGATAACC GAATCCGGAT TCTCATTGAG AATGGAGTAG
121CTGAGCGGCA AAGATCTCTC TTTGTTGTAG TTGGGGATCG AGGAAAAGAT CAGGTGGTAA
181TACTTCATCA CATGTTATCC AAAGCAACTG TGAAGGCTCG GCCTTCAGTG CTGTGGTGTT
241ATAAGAAAGA GCTGGGGTTT AGCAGTCACC GGAAGAAAAG AATGCGACAG CTGCAGAAGA
301AAATAAAGAA TGGAACACTG AACATAAAGC AGGACGACCC CTTTGAACTC TTCATAGCAG
361CCACAAACAT TCGCTACTGC TACTACAACG AGACCCACAA GATCCTGGGC AATACCTTCG
421GCATGTGTGT GCTGCAGGAT TTTGAAGCCT TAACTCCAAA CTTGCTGGCC AGGACTGTAG
481AAACAGTGGA AGGTGGTGGG CTAGTGGTCA TCCTCCTACG GACCATGAAC TCACTCAAGC
541AATTGTACAC AGTGACTATG GATGTGCATT CCAGGTACAG AACTGAGGCC CATCAGGATG
601TGGTGGGAAG ATTTAATGAA AGGTTTATTC TGTCTCTGGC CTCTTGTAAG AAGTGTCTCG
661TCATTGATGA CCAGCTCAAC ATCCTGCCCA TCTCCTCCCA CGTTGCCACC ATGGAGGCCC
721TGCCTCCCCA GACTCCGGAT GAGAGTCTTG GTCCTTCTGA TCTGGAGCTG AGGGAGTTGA
781AGGAGAGCTT GCAGGACACC CAGCCTGTGG GTGTGTTGGT GGACTGCTGT AAGACTCTAG
841ACCAGGCCAA AGCTGTCTTG AAATTTATCG AGGGCATCTC TGAAAAGACC CTGAGGAGTA
901CTGTTGCACT CACAGCTGCT CGAGGACGGG GAAAATCTGC AGCCCTGGGA TTGGCGATTG
961CTGGGGCGGT GGCATTTGGG TACTCCAATA TCTTTGTTAC CTCCCCAAGC CCTGATAACC
1021TCCATACTCT GTTTGAATTT GTATTTAAAG GATTTGATGC TCTGCAATAT CAGGAACATC
1081TGGATTATGA GATTATCCAG TCTCTAAATC CTGAATTTAA CAAAGCAGTG ATCAGAGTGA
1141ATGTATTTCG AGAACACAGG CAGACTATTC AGTATATACA TCCTGCAGAT GCTGTGAAGC
1201TGGGCCAGGC TGAACTAGTT GTGATTGATG AAGCTGCCGC CATCCCCCTC CCCTTGGTGA
1261AGAGCCTACT TGGCCCCTAC CTTGTTTTCA TGGCATCCAC CATCAATGGC TATGAGGGCA
1321CTGGCCGGTC ACTGTCCCTC AAGCTAATTC AGCAGCTCCG TCAACAGAGC GCCCAGAGCC
1381AGGTCAGCAC CACTGCTGAG AATAAGACCA CGACGACAGC CAGATTGGCA TCAGCGCGGA
1441CACTGCATGA GGTTTCCCTC CAGGAGTCAA TCCGATACGC CCCTGGGGAT GCAGTGGAGA
1501AGTGGCTGAA TGACTTGCTG TGCCTGGATT GCCTCAACAT CACTCGGATA GTCTCAGGCT
1561GCCCCTTGCC TGAAGCTTGT GAACTGTACT ATGTTAATAG AGATACCCTC TTTTGCTACC
1621ACAAGGCCTC TGAAGTTTTC CTCCAACGGC TTATGGCCCT CTACGTGGCT TCTCACTACA
1681AGAACTCTCC CAATGATCTC CAGATGCTCT CCGATGCACC TGCTCACCAT CTCTTCTGCC
1741TTCTGCCTCC TGTGCCCCCC ACCCAGAATG CCCTTCCAGA AGTGCTTGCT GTTATCCAGG
1801TGTGCCTTGA AGGGGAGATT TCTCGCCAGT CCATCTTGAA CAGTCTGTCT CGAGGCAAGA
1861AGGCTTCAGG GGACCTGATT CCATGGACAG TGTCAGAACA GTTCCAAGAT CCAGACTTTG
1921GTGGTCTGTC TGGTGGAAGG GTCGTTCGCA TTGCTGTTCA CCCAGATTAT CAAGGGATGG
1981GCTATGGCAG CCGTGCTCTG CAGCTGCTGC AGATGTACTA TGAAGGCAGG TTTCCTTGTC
2041TGGAGGAAAA GGTCCTTGAG ACACCACAGG AAATTCACAC CGTAAGCAGC GAGGCTGTCA
2101GCTTGTTGGA AGAGGTCATC ACTCCCCGGA AGGACCTGCC TCCTTTACTC CTCAAATTGA
2161ATGAGAGGCC TGCCGAACGC CTGGATTACC TGGGTGTTTC CTATGGCTTG ACCCCCAGGC
2221TCCTCAAGTT CTGGAAACGA GCTGGATTTG TTCCTGTTTA TCTGAGACAG ACCCCGAATG
2281ACCTGACCGG AGAGCACTCG TGCATCATGC TGAAGACGCT CACTGATGAG GATGAGGCTG
2341ACCAGGGAGG CTGGCTTGCA GCCTTCTGGA AAGATTTCCG ACGGCGGTTC CTAGCCTTGC
2401TCTCCTACCA GTTCAGTACC TTCTCTCCTT CCCTGGCTCT GAACATCATT CAGAACAGGA
2461ACATGGGGAA GCCAGCCCAG CCTGCCCTGA GCCGGGAGGA GCTGGAAGCA CTCTTCCTCC
2521CCTATGACCT GAAGCGGCTG GAGATGTATT CACGGAATAT GGTGGACTAT CACCTCATCA
2581TGGACATGAT CCCGGCCATC TCTCGCATCT ATTTCCTGAA CCAGCTGGGG GACCTGGCCC
2641TGTCTGCGGC TCAGTCGGCT CTTCTCTTGG GGATTGGCCT GCAGCATAAG TCTGTGGACC
2701AGCTGGAAAA GGAGATTGAG CTGCCCTCGG GCCAGTTGAT GGGACTTTTC AACCGGATCA
2761TCCGCAAAGT TGTGAAGCTA TTTAATGAAG TTCAGGAAAA GGCCATTGAG GAGCAGATGG
2821TGGCAGCGAA GGATGTGGTC ATGGAGCCCA CGATGAAGAC CCTCAGTGAC GACCTAGATG
2881AAGCAGCAAA GGAATTTCAG GAGAAACACA AGAAGGAAGT AGGGAAGCTG AAGAGCATGG
2941ACCTCTCTGA ATACATAATC CGTGGGGACG ATGAAGAGTG GAATGAAGTT TTGAACAAAG
3001CTGGGCCGAA CGCCTCGATC ATCAGCCTGA AAAGTGACAA GAAAAGGAAG TTAGAGGCCA
3061AACAAGAACC CAAACAGAGC AAGAAGTTGA AGAACAGAGA GACAAAGAAC AAAAAAGATA
3121TGAAACTGAA GCGGAAGAAA TACCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
3181attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)