Construct: ORF ccsbBroadEn_03629

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014263.1_s300c1, BRDN0000390741
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KANSL3 (55683)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55683 KANSL3 KAT8 regulatory NSL complex... NM_001115016.3 100% 100%
2 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_005263987.1 99.7% 99.7% 1931_1932insAGCTGC
3 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511460.3 98.2% 98% (many diffs)
4 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511461.3 97.9% 97.8% (many diffs)
5 human 55683 KANSL3 KAT8 regulatory NSL complex... NM_001349257.2 97.1% 97.1% 1741_1818del
6 human 55683 KANSL3 KAT8 regulatory NSL complex... NM_001349258.2 96.9% 96.9% 1741_1818del;2009_2010insAGCTGC
7 human 55683 KANSL3 KAT8 regulatory NSL complex... NM_001349256.2 96.4% 96.1% (many diffs)
8 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511454.3 95.4% 95.3% (many diffs)
9 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511455.3 95.4% 95.3% (many diffs)
10 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511456.3 95.4% 95.3% (many diffs)
11 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511457.3 95.4% 95.3% (many diffs)
12 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511458.3 95.2% 95% (many diffs)
13 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511459.3 92.6% 92.5% (many diffs)
14 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511462.3 89.2% 88.9% (many diffs)
15 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511466.3 88.4% 88.3% (many diffs)
16 human 55683 KANSL3 KAT8 regulatory NSL complex... NM_001349259.2 87.5% 87.5% 0_1ins261;1480_1557del
17 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511463.3 85.9% 85.8% (many diffs)
18 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511464.3 85.9% 85.8% (many diffs)
19 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_017004472.2 85.7% 85.6% (many diffs)
20 human 55683 KANSL3 KAT8 regulatory NSL complex... XR_002959316.1 84.6% (many diffs)
21 human 55683 KANSL3 KAT8 regulatory NSL complex... XR_002959317.1 81.9% (many diffs)
22 human 55683 KANSL3 KAT8 regulatory NSL complex... XR_922962.1 78.7% (many diffs)
23 human 55683 KANSL3 KAT8 regulatory NSL complex... NM_001349260.2 74.6% 74.1% (many diffs)
24 human 55683 KANSL3 KAT8 regulatory NSL complex... XM_011511467.3 72.9% 72.8% (many diffs)
25 human 55683 KANSL3 KAT8 regulatory NSL complex... NM_001349261.2 71.9% 71.9% 0_1ins684;1057_1134del
26 human 55683 KANSL3 KAT8 regulatory NSL complex... NM_001349262.2 71.9% 71.9% 0_1ins684;1057_1134del
27 human 55683 KANSL3 KAT8 regulatory NSL complex... XR_001738835.1 65.1% (many diffs)
28 human 55683 KANSL3 KAT8 regulatory NSL complex... XR_001738841.2 56.5% (many diffs)
29 human 55683 KANSL3 KAT8 regulatory NSL complex... XR_001738840.2 54.5% (many diffs)
30 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_047653.2 50.4% 1_80del;296_356del;2776_5217del
31 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_047654.2 50.3% (many diffs)
32 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_047656.2 49.3% 1_80del;465_466ins91;2624_5065del
33 human 55683 KANSL3 KAT8 regulatory NSL complex... XR_244892.1 48.9% (many diffs)
34 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_047655.2 48.5% (many diffs)
35 human 55683 KANSL3 KAT8 regulatory NSL complex... XR_427101.1 47.6% (many diffs)
36 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_146098.2 46.7% 1_80del;2336_2337ins223;2492_4933del
37 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_047657.2 46% (many diffs)
38 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_146099.2 45.5% (many diffs)
39 human 55683 KANSL3 KAT8 regulatory NSL complex... XR_922963.2 45.2% (many diffs)
40 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_047658.2 44.4% (many diffs)
41 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_146100.2 44.3% (many diffs)
42 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_146102.2 43.6% (many diffs)
43 human 55683 KANSL3 KAT8 regulatory NSL complex... NR_146101.2 43.6% (many diffs)
44 mouse 226976 Kansl3 KAT8 regulatory NSL complex... NM_172652.3 89.2% 94.4% (many diffs)
45 mouse 226976 Kansl3 KAT8 regulatory NSL complex... NM_001310513.1 86.6% 91.7% (many diffs)
46 mouse 226976 Kansl3 KAT8 regulatory NSL complex... XM_006495902.3 86.2% 91.2% (many diffs)
47 mouse 226976 Kansl3 KAT8 regulatory NSL complex... XM_011238482.2 76.8% 81.1% (many diffs)
48 mouse 226976 Kansl3 KAT8 regulatory NSL complex... XM_017320235.1 76.8% 81.1% (many diffs)
49 mouse 226976 Kansl3 KAT8 regulatory NSL complex... XM_017320236.1 76.8% 81.1% (many diffs)
50 mouse 226976 Kansl3 KAT8 regulatory NSL complex... XM_017320240.1 76.8% 81.1% (many diffs)
51 mouse 226976 Kansl3 KAT8 regulatory NSL complex... XM_017320242.1 54.1% 56.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2700
ORF length:
2634
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CCACCGGGGT GGGGAGAGGG ACTTCCAGAC TTCAGCTCGA CGCATGGGCA
121CCTCGCTGCT CTTCCAGCTT TCAGTGCATG AACGGGAGCT GGACCTGGTT TTTCTGGATC
181ATAGCTATGC CAAGCCTTGG AGTGCCCACC CAGATGCCAG TAGTGCCCGC CCCACCCGCA
241TGCTCTTTGT CACTCCCCGG CGGCAGCACG AAAGTACCAT TGAATCAGAC GTCCCAATAG
301ATGTGGAGAC GGTCACATCA ACGCCTATGC CACTCTATGA CAATCAGAAG GCACGCAGCG
361TGATGAATGA GTGTGAACGG CATGTCATCT TTGCCAGGAC TGATGCAGAT GCCCCTCCTC
421CACCAGAGGA CTGGGAGGAG CATGTCAACA GGACTGGCTG GACAATGGCC CAGAACAAGC
481TATTCAACAA GATCCTCAAA GCCCTGCAGT CTGACCGGCT TGCCCGCTTG GCCAACGAAG
541GGGCTTGTAA TGAGCCAGTG CTGCGCCGTG TTGCTGTGGA CAAGTGTGCA AGGAGAGTGC
601GGCAGGCTCT GGCAAGTGTG AGCTGGGATA CCAAGCTGAT CCAGTGGCTG CACACCACCC
661TTGTGGAGAC CTTGAGTCTG CCCATGCTGG CAGCCTACCT GGATGCTTTG CAGACGCTGA
721AGGGGAAGAT CCCAACCTTG ATTGACCGGA TGCTTGTGTC ATCCAACACA AAGACTGGGG
781CTGCAGGAGC TGAGGCCTTG TCTCTCCTAC TGAAGAGGCC CTGGGACCCT GCTGTGGGTG
841TGCTTTCTCA TAACAAACCA AGCAAACTCC CTGGCTCTCC GCTGATTCTC ATCGCCTCCT
901CTGGTCCCTC CAGCTCTGTG TTTCCCACTT CACGCCGCCA CCGCTTCTGG CAATCTCAGC
961TGTCCTGCTT GGGCAAGGTC ATCCCTGTAG CCACCCATCT GCTGAACAAT GGCAGTGGGG
1021TAGGAGTTCT ACAGTGTCTC GAGCATATGA TTGGGGCAGT GAGAAGCAAA GTGCTGGAGA
1081TTCACAGCCA TTTCCCACAC AAACCCATTA TCTTGATTGG CTGGAACACA GGAGCTTTGG
1141TGGCCTGTCA TGTGTCAGTA ATGGAGTATG TCACTGCAGT TGTCTGCCTT GGGTTTCCTC
1201TGCTTACTGT GGATGGCCCC AGAGGGGATG TAGATGATCC CCTCTTGGAT ATGAAGACTC
1261CAGTCCTCTT TGTCATTGGT CAGAATTCCC TTCAATGTCA CCCTGAAGCC ATGGAGGACT
1321TCCGGGAGAA GATTCGAGCT GAGAACAGCT TGGTGGTGGT TGGGGGAGCT GATGACAATC
1381TCAGAATAAG CAAAGCAAAG AAGAAATCAG AAGGGTTGAC TCAGAGCATG GTGGACAGAT
1441GTATTCAGGA TGAGATTGTG GACTTTCTGA CTGGAGTGCT CACTCGTGCT GAGGGTCACA
1501TGGGCTCTGA ACCTCGGGAT CAGGATGCTG AGAAGAAGAA GAAGCCCCGC GATGTGGCCC
1561GCAGAGACTT GGCCTTTGAA GTCCCTGAGC GGGGCAGTCG ACCTGCCTCC CCAGCTGCCA
1621AGCTGCCCGC CTCACCCTCA GGCTCAGAGG ATCTCTCCAG TGTGTCCAGC AGCCCCACCT
1681CCAGTCCCAA GACCAAAGTG ACCACAGTGA CCTCTGCCCA GAAGTCCAGT CAGATTGGAA
1741GTTCTCAGCT GCTGAAGAGA CATGTGCAGC GGACAGAAGC TGTGCTGACC CACAAACAAG
1801CTCAAGTTCC CATTTCATCA GAACCACCAG AGGAAGGAGA GAAAGAGGAT CTTAGGGTTC
1861AGCTGAAGCG ACACCATCCC TCGAGTCCCC TTCCTGGCAG TAAGACCTCC AAACGACCGA
1921AGATCAAGGT GTCCCTTATC TCCCAAGGGG ACACAGCTGG AGGGCCTTGT GCTCCTTCCC
1981AAGGAAGTGC TCCAGAAGCT GCAGGTGGGA AGCCCATCAC CATGACACTG GGGCAGGCTT
2041CAGCAGGGGC CAAGGAGCTC ACAGGACTTC TCACCACAGC CAAGTCCAGT TCTTCTGAAG
2101GTGGAGTCTC AGCCAGCCCA GTCCCTTCAG TGGTCTCCAG CAGCACTGCA CCCAGTGCCT
2161TGCACACACT GCAGAGCCGC CTGGTGGCCA CATCTCCTGG CAGCTCCCTC CCAGGGGCCA
2221CATCAGCCAG CAGCCTCCTC CAAGGCCTCA GCTTCAGCTT GCAGGATATC AGCAGCAAGA
2281CCTCTGGCCT TCCAGCAAAT CCCTCCCCAG GACCAGCCCC ACAGGCCACC AGTGTGAAGT
2341TGCCCACCCC CATGCAGAGC CTGGGTGCCA TCACCACGGG CACCAGCACC ATTGTCCGTA
2401CCATTCCTGT GGCCACCACT CTCTCCTCCT TGGGTGCCAC TCCTGGTGGG AAGCCCACAG
2461CCATCCACCA GCTGCTGACC AATGGGGGCC TCGCTAAGTT GGCAAGCAGC CTCCCTGGCC
2521TGGCTCAGAT CTCTAACCAA GCATCAGGCT TGAAGGTCCC CACCACCATT ACTCTGACAC
2581TTCGTGGCCA GCCGAGCAGG ATCACTACAC TGAGCCCTAT GGGCTCAGGA GCAGCCCCAT
2641CCGAGGAGTC CTCTTCCCAG GTGCTGCCCT CCAGCTCACA GCGCCTGCCT CCAGCACCCT
2701GCCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
2761acgaac

Download FASTA (ORF) (Full)

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