Construct: ORF ccsbBroadEn_03918

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000639.1_s300c1, BRDN0000391153
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GOLPH3 (64083)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64083 GOLPH3 golgi phosphoprotein 3 NM_022130.4 100% 100%
2 human 64083 GOLPH3 golgi phosphoprotein 3 XM_017009686.2 69.1% 69.1% 0_1ins276
3 mouse 66629 Golph3 golgi phosphoprotein 3 NM_025673.2 92.8% 98.6% (many diffs)
4 mouse 66629 Golph3 golgi phosphoprotein 3 XM_006520143.1 78.8% 83.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
960
ORF length:
894
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC CTCGCTGACC CAGCGCAGCT CCGGCCTGGT GCAGCGGCGC ACCGAGGCCT
121CCCGCAACGC CGCCGACAAG GAGCGGGCGG CGGGCGGCGG CGCCGGCAGC AGCGAGGACG
181ACGCGCAGAG CCGCCGCGAC GAGCAGGACG ACGACGACAA GGGCGACTCC AAGGAAACGC
241GGCTGACCCT GATGGAGGAA GTGCTCCTGC TGGGCCTCAA GGACCGCGAG GGTTACACAT
301CATTTTGGAA TGACTGTATA TCATCTGGAT TACGTGGCTG TATGTTAATT GAATTAGCAT
361TGAGAGGAAG GTTACAACTA GAGGCTTGTG GAATGAGACG TAAAAGTCTA TTAACAAGAA
421AGGTAATCTG TAAGTCAGAT GCTCCAACAG GGGATGTTCT TCTTGATGAA GCTCTGAAGC
481ATGTTAAGGA AACTCAGCCT CCAGAAACGG TCCAGAACTG GATTGAATTA CTTAGTGGTG
541AGACATGGAA TCCATTAAAA TTGCATTATC AGTTAAGAAA TGTACGGGAA CGATTAGCTA
601AAAACCTGGT GGAAAAGGGT GTATTGACAA CAGAGAAACA GAACTTCCTA CTTTTTGACA
661TGACAACACA TCCCCTCACC AATAACAACA TTAAGCAGCG CCTCATCAAG AAAGTACAGG
721AAGCCGTTCT TGACAAATGG GTGAATGACC CTCACCGCAT GGACAGGCGC TTGCTGGCCC
781TCATTTACCT GGCTCATGCC TCGGACGTCC TGGAGAATGC TTTTGCTCCT CTTCTGGACG
841AGCAGTATGA TTTGGCTACC AAGAGAGTGC GGCAGCTTCT CGACTTAGAC CCTGAAGTGG
901AATGTCTGAA GGCCAACACC AATGAGGTTC TGTGGGCGGT GGTGGCGGCG TTCACCAAGT
961ACCCAACTTT CATGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
1021acgaac

Download FASTA (ORF) (Full)