Construct: ORF ccsbBroadEn_04321

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012806.1_s300c1, BRDN0000397011
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DTNBP1 (84062)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84062 DTNBP1 dystrobrevin binding protein 1 NM_032122.4 100% 100%
2 human 84062 DTNBP1 dystrobrevin binding protein 1 XM_005249447.4 95.3% 94.8% (many diffs)
3 human 84062 DTNBP1 dystrobrevin binding protein 1 NM_001271668.1 95.1% 95.1% 107_108ins51
4 human 84062 DTNBP1 dystrobrevin binding protein 1 XM_011514936.3 90.5% 90% (many diffs)
5 human 84062 DTNBP1 dystrobrevin binding protein 1 NM_001271669.1 90% 90% 55_56ins105
6 human 84062 DTNBP1 dystrobrevin binding protein 1 NM_183040.2 79.8% 78.9% (many diffs)
7 human 84062 DTNBP1 dystrobrevin binding protein 1 NM_001271667.1 76.9% 76.9% 0_1ins243
8 human 84062 DTNBP1 dystrobrevin binding protein 1 XM_024446567.1 57.3% 52.9% (many diffs)
9 human 84062 DTNBP1 dystrobrevin binding protein 1 XM_017011349.1 54.8% 52.9% (many diffs)
10 human 84062 DTNBP1 dystrobrevin binding protein 1 XM_017011348.1 54.6% 52.7% (many diffs)
11 human 84062 DTNBP1 dystrobrevin binding protein 1 XM_011514937.2 54.2% 52.5% (many diffs)
12 human 84062 DTNBP1 dystrobrevin binding protein 1 NR_036448.2 47.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1119
ORF length:
1053
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCT GGAGACCCTT CGCGAGCGGC TGCTGAGCGT GCAGCAGGAT TTCACCTCCG
121GGCTGAAGAC TTTAAGTGAC AAGTCAAGAG AAGCAAAAGT GAAAAGCAAA CCCAGGACTG
181TTCCATTTTT GCCAAAGTAC TCTGCTGGAT TAGAATTACT TAGCAGGTAT GAGGATACAT
241GGGCTGCACT TCACAGAAGA GCCAAAGACT GTGCAAGTGC TGGAGAGCTG GTGGATAGCG
301AGGTGGTCAT GCTTTCTGCG CACTGGGAGA AGAAAAAGAC AAGCCTCGTG GAGCTGCAAG
361AGCAGCTCCA GCAGCTCCCA GCTTTAATCG CAGACTTAGA ATCCATGACA GCAAATCTGA
421CTCATTTAGA GGCGAGTTTT GAGGAGGTAG AGAACAACCT GCTGCATCTG GAAGACTTAT
481GTGGGCAGTG TGAATTAGAA AGATGCAAAC ATATGCAGTC CCAGCAACTG GAGAATTACA
541AGAAAAATAA GAGGAAGGAA CTTGAAACCT TCAAAGCTGA ACTAGATGCA GAGCACGCCC
601AGAAGGTCCT GGAAATGGAG CACACCCAGC AAATGAAGCT GAAGGAGCGG CAGAAGTTTT
661TTGAGGAAGC CTTCCAGCAG GACATGGAGC AGTACCTGTC CACTGGCTAC CTGCAGATTG
721CAGAGCGGCG AGAGCCCATA GGCAGCATGT CATCCATGGA AGTGAACGTG GACATGCTGG
781AGCAGATGGA CCTGATGGAC ATATCGGACC AGGAGGCCCT GGACGTCTTC CTGAACTCTG
841GAGGAGAAGA GAACACTGTG CTGTCCCCCG CCTTAGGGCC TGAATCCAGT ACCTGTCAGA
901ATGAGATTAC CCTCCAGGTT CCAAATCCCT CAGAATTAAG AGCCAAGCCA CCTTCTTCTT
961CCTCCACCTG CACCGACTCG GCCACCCGGG ACATCAGTGA GGGTGGGGAG TCCCCCGTTG
1021TTCAGTCCGA TGAGGAGGAA GTTCAGGTGG ACACTGCCCT GGCCACATCA CACACTGACA
1081GAGAGGCCAC TCCGGATGGT GGTGAGGACA GCGACTCTTA CCCAACTTTC TTGTACAAAG
1141Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)