Construct: ORF ccsbBroadEn_04462

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012634.1_s300c1, BRDN0000394702
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARHGAP19 (84986)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84986 ARHGAP19 Rho GTPase activating prote... NM_032900.6 99.9% 100% 822T>C
2 human 84986 ARHGAP19 Rho GTPase activating prote... NM_001256423.2 96.7% 96.3% (many diffs)
3 human 84986 ARHGAP19 Rho GTPase activating prote... NM_001204300.1 94% 94.1% 822T>C;840_841ins87
4 human 100533184 ARHGAP19-SLIT1 ARHGAP19-SLIT1 readthrough ... NR_037909.1 77% (many diffs)
5 mouse 71085 Arhgap19 Rho GTPase activating prote... NM_027667.3 86.2% 87.8% (many diffs)
6 mouse 71085 Arhgap19 Rho GTPase activating prote... XM_011247341.1 83.4% 85.6% (many diffs)
7 mouse 71085 Arhgap19 Rho GTPase activating prote... NM_001163495.1 82% 83.2% (many diffs)
8 mouse 71085 Arhgap19 Rho GTPase activating prote... XM_011247342.1 79.4% 81.4% (many diffs)
9 mouse 71085 Arhgap19 Rho GTPase activating prote... XM_011247343.1 79.2% 81% (many diffs)
10 mouse 71085 Arhgap19 Rho GTPase activating prote... XM_011247344.2 77.7% 76% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1551
ORF length:
1482
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCGACTGAG GCACAGAGTG AAGGGGAGGT GCCAGCCCGC GAATCCGGCC
121GGAGTGATGC CATCTGCAGT TTTGTGATCT GCAATGATTC TTCCCTTCGA GGTCAGCCCA
181TTATCTTTAA TCCTGACTTT TTTGTGGAGA AACTCCGACA TGAGAAACCT GAGATTTTCA
241CTGAGTTGGT GGTCAGCAAT ATCACAAGGC TCATCGATTT ACCTGGAACT GAGTTGGCTC
301AGCTGATGGG GGAAGTGGAC CTTAAGTTGC CTGGCGGGGC TGGCCCAGCA TCAGGATTCT
361TCCGGTCTCT CATGTCTCTC AAGCGAAAGG AAAAAGGAGT GATATTTGGG TCCCCACTGA
421CGGAGGAAGG CATTGCCCAG ATATACCAAC TGATTGAGTA TCTACACAAA AACTTGCGAG
481TAGAGGGTTT GTTTAGAGTA CCGGGTAATA GTGTCCGACA GCAGATTTTA AGGGATGCTC
541TCAATAATGG AACTGACATT GACTTGGAAT CAGGGGAATT TCACTCAAAT GATGTTGCCA
601CTTTGCTGAA GATGTTTCTA GGAGAGTTGC CGGAGCCTCT GCTGACACAT AAACACTTCA
661ATGCACACCT CAAAATCGCT GATTTGATGC AGTTTGATGA TAAAGGAAAC AAGACCAATA
721TACCAGACAA GGACCGGCAA ATTGAGGCTC TCCAGTTGCT CTTCCTCATT CTCCCTCCTC
781CTAATCGTAA TTTGCTGAAG TTATTGCTTG ATCTCCTATA CCAGACAGCA AAGAAACAAG
841ACAAGAACAA GATGTCAGCC TATAACCTTG CCCTTATGTT TGCACCCCAC GTCCTGTGGC
901CAAAAAATGT CACTGCAAAT GACCTTCAGG AGAATATCAC AAAGTTAAAC AGTGGGATGG
961CTTTTATGAT TAAACACTCC CAGAAACTTT TTAAGGCTCC TGCTTACATT CGGGAGTGTG
1021CGAGATTGCA CTATTTGGGA TCCAGAACTC AGGCATCAAA GGATGACCTT GACCTCATAG
1081CTTCATGTCA TACTAAGTCC TTTCAGCTGG CAAAGTCTCA GAAACGGAAC CGGGTAGATT
1141CCTGCCCTCA CCAGGAGGAG ACCCAGCACC ATACGGAAGA GGCACTGAGA GAGCTGTTTC
1201AACACGTTCA TGATATGCCA GAGTCAGCAA AGAAGAAACA ACTTATTAGA CAGTTTAATA
1261AGCAATCATT GACCCAGACA CCAGGGCGAG AACCTTCTAC TTCCCAGGTA CAAAAGAGGG
1321CTCGTTCGCG CTCCTTCAGT GGGCTTATTA AGCGGAAGGT CCTGGGAAAT CAGATGATGT
1381CAGAAAAGAA AAAGAAGAAC CCTACTCCAG AATCTGTGGC CATTGGTGAA TTGAAGGGAA
1441CCAGCAAAGA AAATAGGAAC TTATTATTTT CTGGCTCTCC AGCTGTCACG ATGACACCAA
1501CAAGATTGAA GTGGTCTGAA GGGAAGAAAG AGGGGAAAAA AGGATTTCTC TTGCCAACTT
1561TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)