Construct: ORF ccsbBroadEn_04466

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016955.1_s300c1, BRDN0000386367
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PHYKPL (85007)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... NM_153373.4 100% 100%
2 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_011534671.2 98.6% 98.4% 702_719del
3 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_011534669.2 97.8% 97.6% 702_731del
4 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... NM_001278346.1 90.8% 90.8% 0_1ins123
5 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_006714925.2 90.3% 83.1% (many diffs)
6 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_017009995.1 90.2% 85% (many diffs)
7 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_011534672.2 88.9% 88.6% 0_1ins123;579_608del
8 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_011534670.3 87.3% 81.5% (many diffs)
9 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446240.1 82% 73.8% 701_702ins88;838_839ins155
10 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_017009998.2 81.1% 74.1% (many diffs)
11 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_011534674.2 76.6% 72.2% 337_338ins280;421_422ins35
12 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446241.1 70% 66.5% 702_731del;956_957ins155;996_997ins229
13 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956188.1 69.7% (many diffs)
14 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956186.1 68.6% (many diffs)
15 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956195.1 65.1% (many diffs)
16 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956194.1 65% (many diffs)
17 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446242.1 64.9% 58.7% (many diffs)
18 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956193.1 64.7% 1_234del;935_936ins88;1497_1862del
19 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956196.1 63.7% (many diffs)
20 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956189.1 62.7% (many diffs)
21 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956192.1 61.2% 1_234del;1160_1161ins155;1430_1795del
22 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956190.1 60.3% (many diffs)
23 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... NR_103510.1 59.4% (many diffs)
24 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446244.1 58.6% 58.6% 0_1ins558
25 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_017009999.2 57.3% 57.1% 0_1ins558;144_173del
26 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446243.1 57.3% 57.1% 0_1ins558;144_173del
27 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446248.1 55.7% 54.4% (many diffs)
28 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446249.1 55.2% 54.4% (many diffs)
29 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446250.1 55.2% 54.4% (many diffs)
30 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446246.1 54.6% 47.5% (many diffs)
31 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446247.1 54.6% 47.5% (many diffs)
32 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446245.1 54% 53% (many diffs)
33 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446252.1 51.9% 52% 702_702delAins649
34 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XM_024446251.1 49.8% 47.7% (many diffs)
35 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... NR_103508.1 44.4% (many diffs)
36 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956187.1 44.1% (many diffs)
37 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... NR_103509.1 41% (many diffs)
38 human 85007 PHYKPL 5-phosphohydroxy-L-lysine p... XR_002956191.1 38.8% (many diffs)
39 mouse 72947 Phykpl 5-phosphohydroxy-L-lysine p... NM_028398.2 82.8% 83.7% (many diffs)
40 mouse 72947 Phykpl 5-phosphohydroxy-L-lysine p... XM_006534325.3 82% 82.8% (many diffs)
41 mouse 72947 Phykpl 5-phosphohydroxy-L-lysine p... XM_006534324.3 80.4% 81.2% (many diffs)
42 mouse 72947 Phykpl 5-phosphohydroxy-L-lysine p... XM_006534323.3 79.6% 80.4% (many diffs)
43 mouse 72947 Phykpl 5-phosphohydroxy-L-lysine p... XM_017314796.1 43.8% 40.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1416
ORF length:
1350
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CGCAGACCAG CGCCCGAAGG CCGACACGCT GGCCCTGAGG CAACGGCTCA
121TCAGCTCTTC CTGCAGACTC TTTTTTCCCG AGGATCCTGT TAAGATTGTC CGGGCCCAAG
181GGCAGTACAT GTACGATGAA CAGGGGGCAG AATACATCGA TTGCATCAGC AATGTGGCGC
241ACGTTGGGCA CTGCCACCCT CTCGTGGTCC AAGCAGCACA TGAGCAGAAC CAGGTGCTCA
301ACACCAACAG CCGGTACCTG CATGACAACA TCGTGGACTA TGCGCAGAGG CTGTCAGAGA
361CCCTGCCGGA GCAGCTCTGT GTGTTCTATT TCCTGAATTC TGGGTCAGAA GCCAATGACC
421TGGCCCTGAG GCTGGCTCGC CACTACACGG GACACCAGGA CGTGGTGGTA TTAGATCATG
481CGTATCACGG CCACCTGAGC TCCCTGATTG ACATCAGTCC CTACAAGTTC CGCAACCTGG
541ATGGCCAGAA GGAGTGGGTC CACGTGGCAC CTCTCCCAGA CACCTACCGG GGCCCCTACC
601GGGAGGACCA CCCCAACCCA GCTATGGCCT ATGCCAACGA GGTGAAACGT GTGGTCAGCA
661GTGCACAGGA GAAGGGCAGG AAGATTGCAG CCTTCTTCGC TGAGTCTCTG CCCAGTGTGG
721GAGGGCAGAT CATTCCCCCT GCTGGCTACT TCTCCCAAGT GGCAGAGCAC ATCCGCAAGG
781CCGGAGGGGT CTTTGTTGCA GATGAGATCC AGGTTGGCTT TGGCCGGGTA GGCAAGCACT
841TCTGGGCCTT CCAGCTCCAG GGAAAAGACT TCGTCCCTGA CATCGTCACC ATGGGCAAGT
901CCATTGGCAA CGGCCACCCT GTTGCCTGCG TGGCCGCAAC CCAGCCTGTG GCGAGGGCAT
961TTGAAGCCAC CGGCGTTGAG TACTTCAACA CGTTTGGGGG CAGCCCAGTG TCCTGCGCTG
1021TGGGGCTGGC CGTCCTGAAT GTCTTGGAGA AGGAGCAGCT CCAGGATCAT GCCACCAGTG
1081TAGGCAGCTT CCTGATGCAG CTCCTCGGGC AGCAAAAAAT CAAACATCCC ATCGTCGGGG
1141ATGTCAGGGG TGTTGGGCTC TTCATTGGTG TGGATCTGAT CAAAGATGAG GCCACAAGGA
1201CACCAGCAAC TGAAGAGGCT GCCTACTTGG TATCAAGGCT GAAGGAGAAC TACGTTTTGC
1261TGAGCACTGA TGGCCCTGGG AGGAACATCC TGAAGTTTAA GCCCCCAATG TGCTTCAGCC
1321TGGACAATGC ACGGCAGGTG GTGGCAAAGC TGGATGCCAT TCTGACTGAC ATGGAAGAGA
1381AGGTGAGAAG TTGTGAAACG CTGAGGCTCC AGCCCTACCC AACTTTCTTG TACAAAGTtg
1441gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)