Construct: ORF ccsbBroadEn_04864

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013090.1_s300c1, BRDN0000392658
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GALM (130589)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 130589 GALM galactose mutarotase NM_138801.3 100% 100%
2 human 130589 GALM galactose mutarotase XR_244925.2 63.3% 1_240del;872_942del;1158_1159ins179
3 human 130589 GALM galactose mutarotase XM_011532540.2 62.7% 62.2% (many diffs)
4 mouse 319625 Galm galactose mutarotase NM_176963.4 85.5% 87.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1092
ORF length:
1026
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TTCGGTGACC AGGGCCGTGT TTGGAGAGCT GCCCTCGGGA GGAGGGACAG
121TGGAGAAGTT CCAGCTGCAG TCAGACCTCT TGAGAGTGGA CATCATCTCC TGGGGCTGCA
181CGATCACAGC CCTAGAGGTC AAAGACAGGC AGGGGAGAGC CTCGGACGTG GTGCTTGGCT
241TCGCCGAGTT GGAAGGATAC CTCCAAAAGC AGCCATACTT TGGAGCAGTT ATTGGGAGGG
301TGGCCAACCG AATCGCCAAA GGAACCTTCA AGGTGGATGG GAAGGAGTAT CACCTGGCCA
361TTAACAAGGA ACCCAACAGT CTGCATGGAG GAGTCAGAGG GTTTGATAAA GTGCTCTGGA
421CCCCTCGGGT GCTGTCAAAT GGCGTCCAGT TCTCGCGCAT CAGTCCAGAT GGTGAAGAAG
481GCTACCCCGG AGAGTTAAAA GTCTGGGTGA CATACACCCT GGATGGCGGA GAGCTCATAG
541TCAACTACAG AGCACAAGCC AGTCAGGCCA CACCAGTCAA CCTGACCAAC CATTCTTACT
601TCAACCTGGC AGGCCAGGCT TCCCCAAATA TAAATGACCA TGAAGTCACC ATAGAAGCGG
661ATACTTATTT GCCTGTGGAT GAAACCCTGA TTCCTACAGG AGAAGTTGCC CCAGTGCAAG
721GCACTGCATT CGACCTGAGA AAGCCAGTGG AGCTTGGAAA ACACCTGCAG GACTTCCATC
781TCAATGGTTT TGACCACAAT TTCTGTCTGA AGGGATCTAA AGAAAAGCAT TTTTGTGCAA
841GGGTGCATCA TGCTGCAAGC GGGCGGGTAC TAGAAGTATA CACCACCCAG CCCGGGGTCC
901AGTTTTACAC GGGCAACTTC CTGGATGGCA CATTAAAGGG CAAGAATGGA GCTGTCTATC
961CCAAGCACTC CGGTTTCTGC CTGGAGACTC AGAACTGGCC TGATGCAGTC AATCAGCCCC
1021GCTTCCCTCC TGTGCTGCTG AGGCCTGGTG AGGAGTATGA CCACACCACC TGGTTCAAGT
1081TTTCTGTGGC TTACCCAACT TTCTTGTACA AAGTtggcat tataagaaag cattgcttat
1141caatttgttg caacgaac

Download FASTA (ORF) (Full)