Construct: ORF ccsbBroadEn_05825

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008967.1_s300c1, BRDN0000390356
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANXA2 (302)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 302 ANXA2 annexin A2 NM_001002857.2 99.9% 100% 304C>T
2 human 302 ANXA2 annexin A2 NM_001136015.3 99.9% 100% 304C>T
3 human 302 ANXA2 annexin A2 NM_004039.3 99.9% 100% 304C>T
4 human 302 ANXA2 annexin A2 XM_017022090.1 99.9% 100% 304C>T
5 human 302 ANXA2 annexin A2 XM_017022091.1 99.9% 100% 304C>T
6 human 302 ANXA2 annexin A2 NM_001002858.3 94.8% 94.9% 1_54del;358C>T
7 human 304 ANXA2P2 annexin A2 pseudogene 2 NR_003573.1 76.3% (many diffs)
8 human 303 ANXA2P1 annexin A2 pseudogene 1 NR_001562.2 68.7% (many diffs)
9 human 305 ANXA2P3 annexin A2 pseudogene 3 NR_001446.2 68.3% (many diffs)
10 human 302 ANXA2 annexin A2 XM_017022092.1 65.4% 65.4% 0_1ins351
11 human 302 ANXA2 annexin A2 XM_017022093.1 65.4% 65.4% 0_1ins351
12 human 302 ANXA2 annexin A2 XM_024449908.1 65.4% 65.4% 0_1ins351
13 mouse 12306 Anxa2 annexin A2 NM_007585.3 89.4% 97.6% (many diffs)
14 mouse 12306 Anxa2 annexin A2 XM_006510796.2 89.4% 97.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1083
ORF length:
1017
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC TACTGTTCAC GAAATCCTGT GCAAGCTCAG CTTGGAGGGT GATCACTCTA
121CACCCCCAAG TGCATATGGG TCTGTCAAAG CCTATACTAA CTTTGATGCT GAGCGGGATG
181CTTTGAACAT TGAAACAGCC ATCAAGACCA AAGGTGTGGA TGAGGTCACC ATTGTCAACA
241TTTTGACCAA CCGCAGCAAT GCACAGAGAC AGGATATTGC CTTCGCCTAC CAGAGAAGGA
301CCAAAAAGGA ACTTGCATCA GCACTGAAGT CAGCCTTATC TGGCCACCTG GAGACGGTGA
361TTTTGGGCTT ATTGAAGACA CCTGCTCAGT ATGACGCTTC TGAGCTAAAA GCTTCCATGA
421AGGGGCTGGG AACCGACGAG GACTCTCTCA TTGAGATCAT CTGCTCCAGA ACCAACCAGG
481AGCTGCAGGA AATTAACAGA GTCTACAAGG AAATGTACAA GACTGATCTG GAGAAGGACA
541TTATTTCGGA CACATCTGGT GACTTCCGCA AGCTGATGGT TGCCCTGGCA AAGGGTAGAA
601GAGCAGAGGA TGGCTCTGTC ATTGATTATG AACTGATTGA CCAAGATGCT CGGGATCTCT
661ATGACGCTGG AGTGAAGAGG AAAGGAACTG ATGTTCCCAA GTGGATCAGC ATCATGACCG
721AGCGGAGCGT GCCCCACCTC CAGAAAGTAT TTGATAGGTA CAAGAGTTAC AGCCCTTATG
781ACATGTTGGA AAGCATCAGG AAAGAGGTTA AAGGAGACCT GGAAAATGCT TTCCTGAACC
841TGGTTCAGTG CATTCAGAAC AAGCCCCTGT ATTTTGCTGA TCGGCTGTAT GACTCCATGA
901AGGGCAAGGG GACGCGAGAT AAGGTCCTGA TCAGAATCAT GGTCTCCCGC AGTGAAGTGG
961ACATGTTGAA AATTAGGTCT GAATTCAAGA GAAAGTACGG CAAGTCCCTG TACTATTATA
1021TCCAGCAAGA CACTAAGGGC GACTACCAGA AAGCGCTGCT GTACCTGTGT GGTGGAGATG
1081ACTGCCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
1141gcaacgaac

Download FASTA (ORF) (Full)

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