Construct: ORF ccsbBroadEn_06116

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004894.1_s300c1, BRDN0000457101
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DPP4 (1803)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1803 DPP4 dipeptidyl peptidase 4 NM_001935.4 99.9% 99.8% 278G>A
2 human 1803 DPP4 dipeptidyl peptidase 4 XM_005246371.3 99.8% 99.6% 94_95insCAG;275G>A
3 mouse 13482 Dpp4 dipeptidylpeptidase 4 NM_010074.3 85.4% 84.3% (many diffs)
4 mouse 13482 Dpp4 dipeptidylpeptidase 4 NM_001159543.1 82.2% 80.6% (many diffs)
5 mouse 13482 Dpp4 dipeptidylpeptidase 4 XM_006498692.4 76.1% 74.4% (many diffs)
6 mouse 13482 Dpp4 dipeptidylpeptidase 4 XM_011239274.3 75.8% 71% (many diffs)
7 mouse 13482 Dpp4 dipeptidylpeptidase 4 XM_006498691.4 75.6% 74.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2364
ORF length:
2298
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA GACACCGTGG AAGGTTCTTC TGGGACTGCT GGGTGCTGCT GCGCTTGTCA
121CCATCATCAC CGTGCCCGTG GTTCTGCTGA ACAAAGGCAC AGATGATGCT ACAGCTGACA
181GTCGCAAAAC TTACACTCTA ACTGATTACT TAAAAAATAC TTATAGACTG AAGTTATACT
241CCTTAAGATG GATTTCAGAT CATGAATATC TCTACAAACA AGAAAATAAT ATCTTGGTAT
301TCAATGCTGA ATATGGAAAC AGCTCAGTTT TCTTGGAGAA CAATACATTT GATGAGTTTG
361GACATTCTAT CAATGATTAT TCAATATCTC CTGATGGGCA GTTTATTCTC TTAGAATACA
421ACTACGTGAA GCAATGGAGG CATTCCTACA CAGCTTCATA TGACATTTAT GATTTAAATA
481AAAGGCAGCT GATTACAGAA GAGAGGATTC CAAACAACAC ACAGTGGGTC ACATGGTCAC
541CAGTGGGTCA TAAATTGGCA TATGTTTGGA ACAATGACAT TTATGTTAAA ATTGAACCAA
601ATTTACCAAG TTACAGAATC ACATGGACGG GGAAAGAAGA TATAATATAT AATGGAATAA
661CTGACTGGGT TTATGAAGAG GAAGTCTTCA GTGCCTACTC TGCTCTGTGG TGGTCTCCAA
721ACGGCACTTT TTTAGCATAT GCCCAATTTA ACGACACAGA AGTCCCACTT ATTGAATACT
781CCTTCTACTC TGATGAGTCA CTGCAGTACC CAAAGACTGT ACGGGTTCCA TATCCAAAGG
841CAGGAGCTGT GAATCCAACT GTAAAGTTCT TTGTTGTAAA TACAGACTCT CTCAGCTCAG
901TCACCAATGC AACTTCCATA CAAATCACTG CTCCTGCTTC TATGTTGATA GGGGATCACT
961ACTTGTGTGA TGTGACATGG GCAACACAAG AAAGAATTTC TTTGCAGTGG CTCAGGAGGA
1021TTCAGAACTA TTCGGTCATG GATATTTGTG ACTATGATGA ATCCAGTGGA AGATGGAACT
1081GCTTAGTGGC ACGGCAACAC ATTGAAATGA GTACTACTGG CTGGGTTGGA AGATTTAGGC
1141CTTCAGAACC TCATTTTACC CTTGATGGTA ATAGCTTCTA CAAGATCATC AGCAATGAAG
1201AAGGTTACAG ACACATTTGC TATTTCCAAA TAGATAAAAA AGACTGCACA TTTATTACAA
1261AAGGCACCTG GGAAGTCATC GGGATAGAAG CTCTAACCAG TGATTATCTA TACTACATTA
1321GTAATGAATA TAAAGGAATG CCAGGAGGAA GGAATCTTTA TAAAATCCAA CTTAGTGACT
1381ATACAAAAGT GACATGCCTC AGTTGTGAGC TGAATCCGGA AAGGTGTCAG TACTATTCTG
1441TGTCATTCAG TAAAGAGGCG AAGTATTATC AGCTGAGATG TTCCGGTCCT GGTCTGCCCC
1501TCTATACTCT ACACAGCAGC GTGAATGATA AAGGGCTGAG AGTCCTGGAA GACAATTCAG
1561CTTTGGATAA AATGCTGCAG AATGTCCAGA TGCCCTCCAA AAAACTGGAC TTCATTATTT
1621TGAATGAAAC AAAATTTTGG TATCAGATGA TCTTGCCTCC TCATTTTGAT AAATCCAAGA
1681AATATCCTCT ACTATTAGAT GTGTATGCAG GCCCATGTAG TCAAAAAGCA GACACTGTCT
1741TCAGACTGAA CTGGGCCACT TACCTTGCAA GCACAGAAAA CATTATAGTA GCTAGCTTTG
1801ATGGCAGAGG AAGTGGTTAC CAAGGAGATA AGATCATGCA TGCAATCAAC AGAAGACTGG
1861GAACATTTGA AGTTGAAGAT CAAATTGAAG CAGCCAGACA ATTTTCAAAA ATGGGATTTG
1921TGGACAACAA ACGAATTGCA ATTTGGGGCT GGTCATATGG AGGGTACGTA ACCTCAATGG
1981TCCTGGGATC GGGAAGTGGC GTGTTCAAGT GTGGAATAGC CGTGGCGCCT GTATCCCGGT
2041GGGAGTACTA TGACTCAGTG TACACAGAAC GTTACATGGG TCTCCCAACT CCAGAAGACA
2101ACCTTGACCA TTACAGAAAT TCAACAGTCA TGAGCAGAGC TGAAAATTTT AAACAAGTTG
2161AGTACCTCCT TATTCATGGA ACAGCAGATG ATAACGTTCA CTTTCAGCAG TCAGCTCAGA
2221TCTCCAAAGC CCTGGTCGAT GTTGGAGTGG ATTTCCAGGC AATGTGGTAT ACTGATGAAG
2281ACCATGGAAT AGCTAGCAGC ACAGCACACC AACATATATA TACCCACATG AGCCACTTCA
2341TAAAACAATG TTTCTCTTTA CCTTACCCAA CTTTCTTGTA CAAAGTTGGc attataagaa
2401agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)