Construct: ORF ccsbBroadEn_07379

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008931.1_s300c1, BRDN0000396420
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DHRS3 (9249)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9249 DHRS3 dehydrogenase/reductase 3 NM_004753.7 100% 100%
2 human 9249 DHRS3 dehydrogenase/reductase 3 NM_001319225.2 71.8% 71.8% 0_1ins255
3 human 9249 DHRS3 dehydrogenase/reductase 3 NM_001324370.2 71.8% 71.8% 0_1ins255
4 human 9249 DHRS3 dehydrogenase/reductase 3 XM_017002809.1 71.8% 71.8% 0_1ins255
5 human 9249 DHRS3 dehydrogenase/reductase 3 XM_006711036.2 59.6% 37.2% 337_338ins359;548_558del
6 mouse 20148 Dhrs3 dehydrogenase/reductase (SD... NM_011303.6 88.1% 95% (many diffs)
7 mouse 20148 Dhrs3 dehydrogenase/reductase (SD... NM_001172424.1 80.7% 87.4% (many diffs)
8 mouse 20148 Dhrs3 dehydrogenase/reductase (SD... XM_006538678.2 80.7% 87.4% (many diffs)
9 mouse 20148 Dhrs3 dehydrogenase/reductase (SD... XM_006538679.3 72.2% 75.5% (many diffs)
10 mouse 20148 Dhrs3 dehydrogenase/reductase (SD... XM_017320087.1 63.5% 69.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
972
ORF length:
906
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGT GTGGAAACGG CTGGGCGCGC TGGTGATGTT CCCTCTACAG ATGATCTATC
121TGGTGGTGAA AGCAGCCGTC GGACTGGTGC TGCCCGCCAA GCTGCGGGAC CTGTCGCGGG
181AGAACGTCCT CATCACCGGC GGCGGGAGAG GCATCGGGCG TCAGCTCGCC CGCGAGTTCG
241CGGAGCGCGG CGCCAGAAAG ATTGTTCTCT GGGGCCGGAC TGAGAAATGC CTGAAGGAGA
301CGACGGAGGA GATCCGGCAG ATGGGCACTG AGTGCCATTA CTTCATCTGT GATGTGGGCA
361ACCGGGAGGA GGTGTACCAG ACGGCCAAGG CCGTCCGGGA GAAGGTGGGT GACATCACCA
421TCCTGGTGAA CAATGCCGCC GTGGTCCATG GGAAGAGCCT AATGGACAGT GATGATGATG
481CCCTCCTCAA GTCCCAACAC ATCAACACCC TGGGCCAGTT CTGGACCACC AAGGCCTTCC
541TGCCGCGTAT GCTGGAGCTG CAGAATGGCC ACATCGTGTG CCTCAACTCC GTGCTGGCAC
601TGTCTGCCAT CCCCGGTGCC ATCGACTACT GCACATCCAA AGCGTCAGCC TTCGCCTTCA
661TGGAGAGCCT GACCCTGGGG CTGCTGGACT GTCCGGGAGT CAGCGCCACC ACAGTGCTGC
721CCTTCCACAC CAGCACCGAG ATGTTCCAGG GCATGAGAGT CAGGTTTCCC AACCTCTTTC
781CCCCACTGAA GCCGGAGACG GTGGCCCGGA GGACAGTGGA AGCTGTGCAG CTCAACCAGG
841CCCTCCTCCT CCTCCCATGG ACAATGCATG CCCTCGTTAT CTTGAAAAGC ATACTTCCAC
901AGGCTGCACT CGAGGAGATC CACAAATTCT CAGGAACCTA CACCTGCATG AACACTTTCA
961AAGGGCGGAC ATACCCAACT TTCTTGTACA AAGTtggcat tataagaaag cattgcttat
1021caatttgttg caacgaac

Download FASTA (ORF) (Full)