Construct: ORF ccsbBroadEn_07732

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001792.1_s300c1, BRDN0000391420
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TENT4A (11044)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11044 TENT4A terminal nucleotidyltransfe... XM_024454343.1 99.9% 100% 792T>C
2 human 11044 TENT4A terminal nucleotidyltransfe... XM_017008988.2 98.2% 98.3% 0_1ins27;765T>C
3 human 11044 TENT4A terminal nucleotidyltransfe... XM_017008989.2 98.2% 98.3% 0_1ins27;765T>C
4 human 11044 TENT4A terminal nucleotidyltransfe... XM_011513945.1 92% 92% 364_365ins129;663T>C
5 human 11044 TENT4A terminal nucleotidyltransfe... NM_006999.6 68.3% 68.4% 1_750del;1542T>C
6 human 11044 TENT4A terminal nucleotidyltransfe... NM_001171805.3 68.2% 68.3% 1_750del;1542T>C;2182_2183insAGC
7 human 11044 TENT4A terminal nucleotidyltransfe... XM_017008990.1 66.7% 66.7% 0_1ins540;252T>C
8 mouse 210106 Papd7 PAP associated domain conta... NM_198600.2 86.7% 94.8% (many diffs)
9 mouse 210106 Papd7 PAP associated domain conta... NM_001169131.1 86.5% 94.6% (many diffs)
10 mouse 210106 Papd7 PAP associated domain conta... XM_006517185.1 59.9% 65.4% (many diffs)
11 mouse 210106 Papd7 PAP associated domain conta... XM_006517186.1 59.8% 65.3% (many diffs)
12 mouse 210106 Papd7 PAP associated domain conta... XM_006517187.1 54.3% 59.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1695
ORF length:
1626
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GTCCCCTTGT CCTGAAGAAG CAGCTATGAG AAGAGAGGTG GTGAAACGGA
121TCGAAACTGT GGTGAAAGAC CTTTGGCCGA CGGCTGATGT ACAGATATTT GGCAGCTTTA
181GTACAGGTCT TTATCTTCCA ACTAGCGACA TAGACCTGGT GGTCTTCGGG AAATGGGAGC
241GTCCTCCTTT ACAGCTGCTG GAGCAAGCCC TGCGGAAGCA CAACGTGGCT GAGCCGTGTT
301CCATCAAAGT CCTTGACAAG GCTACGGTAC CAATAATAAA GCTCACAGAT CAGGAGACTG
361AAGTGAAAGT TGACATCAGC TTTAACATGG AGACGGGCGT CCGGGCAGCG GAGTTCATCA
421AGAATTACAT GAAGAAATAT TCATTGCTGC CTTACTTGAT TTTAGTATTG AAACAGTTCC
481TTCTGCAGAG GGACCTGAAT GAAGTTTTTA CAGGTGGAAT TAGCTCATAC AGCCTAATTT
541TAATGGCCAT TAGCTTTCTA CAGTTGCATC CAAGAATTGA TGCCCGGAGA GCTGATGAAA
601ACCTTGGAAT GCTTCTTGTA GAATTTTTTG AACTCTATGG GAGAAATTTT AATTACTTGA
661AAACCGGTAT TAGAATCAAA GAAGGAGGTG CCTATATCGC CAAAGAGGAG ATCATGAAAG
721CCATGACCAG CGGGTACAGA CCGTCGATGC TGTGCATTGA GGACCCCCTG CTGCCAGGGA
781ATGACGTTGG CCGGAGCTCC TATGGCGCCA TGCAGGTGAA GCAGGTCTTC GATTATGCCT
841ACATAGTGCT CAGCCATGCC GTGTCACCGC TGGCCAGGTC CTATCCAAAC AGAGACGCCG
901AAAGTACTTT AGGAAGAATC ATCAAAGTAA CTCAGGAGGT GATTGACTAC CGGAGGTGGA
961TCAAAGAGAA GTGGGGCAGC AAAGCCCACC CGTCGCCAGG CATGGACAGC AGGATCAAGA
1021TCAAAGAGCG AATAGCCACA TGCAATGGGG AGCAGACGCA GAACCGAGAG CCCGAGTCTC
1081CCTATGGCCA GCGCTTGACT TTGTCGCTGT CCAGCCCCCA GCTCCTGTCT TCAGGCTCCT
1141CGGCCTCTTC TGTGTCTTCA CTTTCTGGGA GTGACGTTGA TTCAGACACA CCGCCCTGCA
1201CAACGCCCAG TGTTTACCAG TTCAGTCTGC AAGCGCCAGC TCCTCTCATG GCCGGCTTAC
1261CCACCGCCTT GCCAATGCCC AGTGGCAAAC CTCAGCCCAC CACTTCCAGA ACACTGATCA
1321TGACAACCAA CAATCAGACC AGGTTTACTA TACCTCCACC GACCCTAGGG GTTGCTCCTG
1381TTCCTTGCAG ACAAGCTGGT GTAGAAGGAA CTGCGTCTTT GAAAGCCGTC CACCACATGT
1441CTTCCCCGGC CATTCCCTCA GCGTCCCCCA ACCCGCTCTC GAGCCCTCAT CTGTATCATA
1501AGCAGCACAA CGGCATGAAA CTGTCCATGA AGGGCTCTCA CGGCCACACC CAAGGCGGCG
1561GCTACAGCTC TGTGGGTAGC GGAGGTGTGC GGCCCCCTGT GGGCAACAGG GGACACCACC
1621AGTATAACCG CACCGGCTGG AGGAGGAAAA AACACACACA CACACGGGAC AGTCTGCCCG
1681TGAGCCTCAG CAGATTGCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
1741tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)