Construct: ORF ccsbBroadEn_07774

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000096.1_s300c1, BRDN0000390725
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DUSP10 (11221)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11221 DUSP10 dual specificity phosphatas... NM_007207.6 99.8% 100% 279A>G;726A>G
2 human 11221 DUSP10 dual specificity phosphatas... XM_017000147.2 57.2% 56.4% (many diffs)
3 human 11221 DUSP10 dual specificity phosphatas... NR_111940.1 30.5% (many diffs)
4 human 11221 DUSP10 dual specificity phosphatas... NR_111939.1 27.3% (many diffs)
5 mouse 63953 Dusp10 dual specificity phosphatas... NM_022019.5 92.2% 96.4% (many diffs)
6 mouse 63953 Dusp10 dual specificity phosphatas... XM_006497188.2 92.2% 96.4% (many diffs)
7 mouse 63953 Dusp10 dual specificity phosphatas... XM_006497189.1 92.2% 96.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1512
ORF length:
1446
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC TCCGTCTCCT TTAGACGACA GGGTAGTAGT GGCACTATCT AGGCCCGTCC
121GACCTCAGGA TCTCAACCTT TGTTTAGACT CTAGTTACCT TGGCTCTGCC AACCCAGGCA
181GTAACAGCCA CCCTCCTGTC ATCGCCACCA CCGTTGTGTC CCTCAAGGCT GCGAATCTGA
241CGTATATGCC CTCATCCAGC GGCTCTGCCC GCTCGCTGAA TTGTGGATGC AGCAGTGCCA
301GCTGCTGCAC TGTGGCAACC TACGACAAGG ACAATCAGGC CCAGACCCAA GCCATTGCCG
361CTGGCACCAC CACCACTGCC ATCGGAACCT CTACCACCTG CCCTGCTAAC CAGATGGTCA
421ACAATAATGA GAATACAGGC TCTCTAAGTC CATCAAGTGG GGTGGGCAGC CCTGTGTCAG
481GGACCCCCAA GCAGCTAGCC AGCATCAAAA TAATCTACCC CAATGACTTG GCAAAGAAGA
541TGACCAAATG CAGCAAGAGT CACCTGCCGA GTCAGGGCCC TGTCATCATT GACTGCAGGC
601CCTTCATGGA GTACAACAAG AGTCACATCC AAGGAGCTGT CCACATTAAC TGTGCCGATA
661AGATCAGCCG GCGGAGACTG CAGCAGGGCA AGATCACTGT CCTAGACTTG ATTTCCTGTA
721GGGAAGGCAA GGACTCTTTC AAGAGGATCT TTTCCAAAGA AATTATAGTT TATGATGAGA
781ATACCAATGA GCCAAGCCGA GTGATGCCCT CCCAGCCACT TCACATAGTC CTCGAGTCCC
841TGAAGAGAGA AGGCAAAGAA CCTCTGGTGT TGAAAGGTGG ACTTAGTAGT TTTAAGCAGA
901ACCATGAAAA CCTCTGTGAC AACTCCCTCC AGCTCCAAGA GTGCCGGGAG GTGGGGGGCG
961GCGCATCCGC GGCCTCGAGC TTGCTACCTC AGCCCATCCC CACCACCCCT GACATCGAGA
1021ACGCTGAGCT CACCCCCATC TTGCCCTTCC TGTTCCTTGG CAATGAGCAG GATGCTCAGG
1081ACCTGGACAC CATGCAGCGG CTGAACATCG GCTACGTCAT CAACGTCACC ACTCATCTTC
1141CCCTCTACCA CTATGAGAAA GGCCTGTTCA ACTACAAGCG GCTGCCAGCC ACTGACAGCA
1201ACAAGCAGAA CCTGCGGCAG TACTTTGAAG AGGCTTTTGA GTTCATTGAG GAAGCTCACC
1261AGTGTGGGAA GGGGCTTCTC ATCCACTGCC AGGCTGGGGT GTCCCGCTCC GCCACCATCG
1321TCATCGCTTA CTTGATGAAG CACACTCGGA TGACCATGAC TGATGCTTAT AAATTTGTCA
1381AAGGCAAACG ACCAATTATC TCCCCAAACC TTAACTTCAT GGGGCAGTTG CTAGAGTTCG
1441AGGAAGACCT AAACAACGGT GTGACACCGA GAATCCTTAC ACCAAAGCTG ATGGGCGTGG
1501AGACGGTTGT GTGCCCAACT TTCTTGTACA AAGTtggcat tataagaaag cattgcttat
1561caatttgttg caacgaac

Download FASTA (ORF) (Full)