Construct: ORF ccsbBroadEn_07884

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009734.1_s300c1, BRDN0000395747
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RYBP (23429)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23429 RYBP RING1 and YY1 binding protein NM_012234.6 99.8% 100% 189A>G
2 mouse 56353 Rybp RING1 and YY1 binding protein NM_019743.3 93.5% 99.1% (many diffs)
3 mouse 628746 Rybp-ps RING1 and YY1 binding prote... XR_873606.2 37% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
750
ORF length:
684
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC CATGGGCGAC AAGAAGAGCC CGACCAGGCC AAAAAGACAA GCGAAACCTG
121CCGCAGACGA AGGGTTTTGG GATTGTAGCG TCTGCACCTT CAGAAACAGT GCTGAAGCCT
181TTAAATGCAG CATCTGCGAT GTGAGGAAAG GCACCTCCAC CAGAAAACCT CGGATCAATT
241CTCAGCTGGT GGCGCAACAA GTGGCACAAC AGTATGCCAC CCCACCACCC CCTAAAAAGG
301AGAAGAAGGA GAAAGTTGAA AAGCAGGACA AAGAGAAACC TGAGAAAGAC AAGGAAATTA
361GTCCTAGTGT TACCAAGAAA AATACCAACA AGAAAACCAA ACCAAAGTCT GACATTCTGA
421AAGATCCTCC TAGTGAAGCA AACAGCATAC AGTCTGCAAA TGCTACAACA AAGACCAGCG
481AAACAAATCA CACCTCAAGG CCCCGGCTGA AAAACGTGGA CAGGAGCACT GCACAGCAGT
541TGGCAGTAAC TGTGGGCAAC GTCACCGTCA TTATCACAGA CTTTAAGGAA AAGACTCGCT
601CCTCATCGAC ATCCTCATCC ACAGTGACCT CCAGTGCAGG GTCAGAACAG CAGAACCAGA
661GCAGCTCGGG GTCAGAGAGC ACAGACAAGG GCTCCTCCCG TTCCTCCACG CCAAAGGGCG
721ACATGTCAGC AGTCAATGAT GAATCTTTCT GCCCAACTTT CTTGTACAAA GTtggcatta
781taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)