Construct: ORF ccsbBroadEn_07963

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004247.1_s300c1, BRDN0000392039
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANAPC15 (25906)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 25906 ANAPC15 anaphase promoting complex ... NM_001278487.2 99.7% 100% 174C>T
2 human 25906 ANAPC15 anaphase promoting complex ... NM_001278488.1 99.7% 100% 174C>T
3 human 25906 ANAPC15 anaphase promoting complex ... NM_001278489.2 99.7% 100% 174C>T
4 human 25906 ANAPC15 anaphase promoting complex ... NM_001278490.2 99.7% 100% 174C>T
5 human 25906 ANAPC15 anaphase promoting complex ... NM_001278491.1 99.7% 100% 174C>T
6 human 25906 ANAPC15 anaphase promoting complex ... NM_001278492.1 99.7% 100% 174C>T
7 human 25906 ANAPC15 anaphase promoting complex ... NM_001278493.1 99.7% 100% 174C>T
8 human 25906 ANAPC15 anaphase promoting complex ... NM_001278494.1 99.7% 100% 174C>T
9 human 25906 ANAPC15 anaphase promoting complex ... NM_014042.3 99.7% 100% 174C>T
10 human 25906 ANAPC15 anaphase promoting complex ... XM_017017496.1 99.7% 100% 174C>T
11 human 25906 ANAPC15 anaphase promoting complex ... XM_017017497.1 99.7% 100% 174C>T
12 human 25906 ANAPC15 anaphase promoting complex ... NM_001278485.2 96.5% 96.8% 174C>T;317_328del
13 human 25906 ANAPC15 anaphase promoting complex ... NM_001278486.2 96.5% 96.8% 174C>T;317_328del
14 human 25906 ANAPC15 anaphase promoting complex ... NM_001330321.2 58.4% 53.7% (many diffs)
15 mouse 75430 Anapc15 anaphase prompoting complex... NM_001291349.1 93.9% 100% (many diffs)
16 mouse 75430 Anapc15 anaphase prompoting complex... XM_011241935.2 93.9% 100% (many diffs)
17 mouse 75430 Anapc15 anaphase prompoting complex... NM_001291352.1 86.1% 91.6% (many diffs)
18 mouse 75430 Anapc15 anaphase prompoting complex... NM_001291353.1 86.1% 91.6% (many diffs)
19 mouse 75430 Anapc15 anaphase prompoting complex... NM_027532.4 86.1% 91.6% (many diffs)
20 mouse 75430 Anapc15 anaphase prompoting complex... XM_017312359.1 86.1% 91.6% (many diffs)
21 mouse 75430 Anapc15 anaphase prompoting complex... NM_001291348.1 80.6% 85.8% (many diffs)
22 mouse 75430 Anapc15 anaphase prompoting complex... XM_006508282.3 74% 71.2% (many diffs)
23 mouse 75430 Anapc15 anaphase prompoting complex... XM_006508284.3 74% 71.2% (many diffs)
24 mouse 75430 Anapc15 anaphase prompoting complex... XM_006508285.3 74% 71.2% (many diffs)
25 mouse 75430 Anapc15 anaphase prompoting complex... XM_017312358.1 74% 71.2% (many diffs)
26 mouse 75430 Anapc15 anaphase prompoting complex... XM_006508279.2 68.9% 66.4% (many diffs)
27 mouse 75430 Anapc15 anaphase prompoting complex... XM_006508280.3 68.9% 66.4% (many diffs)
28 mouse 75430 Anapc15 anaphase prompoting complex... XM_011241930.1 68.9% 66.4% (many diffs)
29 mouse 75430 Anapc15 anaphase prompoting complex... XM_011241931.2 68.9% 66.4% (many diffs)
30 mouse 75430 Anapc15 anaphase prompoting complex... XM_011241932.1 68.9% 66.4% (many diffs)
31 mouse 75430 Anapc15 anaphase prompoting complex... XM_011241933.1 68.9% 66.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
429
ORF length:
363
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC CACTTTGTTC CCCTCACTCT TCCCTCGTGT GACTGAGACT CTGTGGTTTA
121ATCTGGATCG ACCCTGTGTG GAAGAGACAG AGCTGCAGCA GCAGGAACAG CAGCATCAGG
181CCTGGCTCCA AAGCATCGCG GAGAAAGACA ACAACCTGGT TCCTATTGGC AAGCCAGCTT
241CAGAGCACTA TGATGACGAG GAAGAAGAGG ATGATGAAGA TGATGAGGAT AGTGAAGAGG
301ACTCAGAGGA TGATGAGGAT ATGCAGGACA TGGACGAGAT GAATGACTAC AATGAGTCAC
361CGGATGATGG AGAGGTCAAT GAGGTGGACA TGGAAGGCAA CGAACAGGAT CAGGACCAGT
421GGATGATCTA CCCAACTTTC TTGTACAAAG Ttggcattat aagaaagcat tgcttatcaa
481tttgttgcaa cgaac

Download FASTA (ORF) (Full)