Construct: ORF ccsbBroadEn_08129

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014691.1_s300c1, BRDN0000395742
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANAPC2 (29882)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 29882 ANAPC2 anaphase promoting complex ... NM_013366.4 99.9% 99.7% 794T>C;2456A>C
2 human 29882 ANAPC2 anaphase promoting complex ... XR_929780.2 90.4% (many diffs)
3 human 29882 ANAPC2 anaphase promoting complex ... XR_929779.2 90.2% (many diffs)
4 human 29882 ANAPC2 anaphase promoting complex ... XR_929781.2 88.8% (many diffs)
5 mouse 99152 Anapc2 anaphase promoting complex ... NM_175300.4 84.6% 92.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
67
ORF end:
2533
ORF length:
2466
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAA
61GTTGGCATGG CGGCGGCAGT TGTGGTGGCG GAGGGGGACA GCGACTCCCG GCCCGGACAG
121GAGTTGTTAG TGGCCTGGAA CACCGTGAGC ACCGGCCTGG TGCCGCCGGC TGCGCTGGGG
181CTGGTGTCTT CCCGGACCAG CGGTGCAGTC CCGCCAAAGG AAGAGGAGCT CCGGGCGGCG
241GTGGAGGTTC TGAGGGGCCA CGGGCTACAC TCGGTCCTGG AGGAGTGGTT CGTGGAGGTG
301CTGCAGAACG ATCTGCAGGC CAACATCTCC CCTGAGTTCT GGAATGCCAT CTCCCAATGC
361GAGAACTCTG CGGATGAGCC CCAGTGCCTT TTGCTACTCC TTGACGCTTT TGGCCTGCTG
421GAGAGCCGCC TGGATCCCTA CCTGCGTAGC CTAGAGCTGC TGGAGAAATG GACTCGCCTG
481GGCTTGCTGA TGGGCACTGG TGCTCAGGGG CTGCGAGAAG AAGTCCACAC TATGTTGCGC
541GGAGTCTTGT TCTTTAGCAC CCCCAGAACC TTCCAAGAGA TGATCCAGCG TCTGTATGGG
601TGCTTCTTGA GAGTCTATAT GCAGAGTAAG AGGAAGGGGG AAGGGGGCAC AGACCCGGAA
661CTGGAAGGGG AGCTGGACAG CCGGTATGCC CGTCGCCGGT ACTACCGGCT CCTGCAGAGC
721CCGCTGTGTG CAGGGTGCAG CAGTGACAAG CAACAGTGCT GGTGTCGCCA GGCTCTGGAG
781CAGTTCCATC AGCTCAGCCA GGTCTTACAC AGGCTCAGTC TGCTGGAGCG GGTCAGTGCC
841GAGGCTGTGA CCACCACCCC GCACCAGGTG ACCCGGGAGA GGATGGAGGA CCGTTGCCGG
901GGCGAGTACG AGCGCTCCTT CCTGCGTGAG TTCCACAAGT GGATCGAGCG GGTGGTCGGC
961TGGCTCGGCA AGGTGTTCCT GCAGGACGGC CCCGCCAGGC CCGCATCTCC CGAGGCCGGC
1021AACACCCTGC GCCGCTGGCG CTGCCACGTG CAAAGGTTCT TCTACCGCAT CTACGCCAGC
1081CTGCGCATCG AGGAGCTCTT CAGCATCGTC CGAGACTTCC CAGACTCCCG GCCAGCCATC
1141GAGGACCTCA AGTACTGCCT GGAGAGGACG GACCAGAGGC AGCAGCTGCT CGTGTCCCTC
1201AAGGCTGCCC TGGAGACTCG GCTCCTGCAT CCAGGCGTCA ACACGTGTGA CATCATCACC
1261CTCTATATCT CTGCCATCAA GGCGCTGCGC GTGCTGGACC CTTCCATGGT CATCCTGGAG
1321GTGGCCTGTG AGCCTATCCG CCGCTACCTG AGGACGCGGG AGGACACAGT GCGGCAGATT
1381GTGGCTGGGC TGACGGGGGA CTCGGACGGG ACAGGGGACC TGGCTGTTGA GCTGTCCAAG
1441ACCGACCCGG CGAGCCTGGA GACAGGCCAG GACAGTGAGG ATGACTCAGG CGAGCCAGAG
1501GACTGGGTCC CGGACCCTGT GGATGCCGAT CCAGGGAAGT CGAGCTCCAA GCGGCGTTCA
1561TCGGACATCA TCAGCCTGCT GGTCAGCATC TACGGCAGCA AGGACCTCTT CATCAATGAG
1621TACCGCTCGC TGCTGGCCGA CCGCCTGCTG CACCAGTTCA GCTTCAGCCC CGAGCGGGAG
1681ATCCGCAACG TGGAGCTGCT GAAGCTGCGC TTTGGCGAGG CCCCAATGCA CTTCTGTGAA
1741GTCATGCTGA AGGACATGGC GGACTCCCGC CGCATCAATG CCAACATCCG GGAGGAGGAT
1801GAGAAGCGGC CAGCAGAGGA GCAGCCACCG TTCGGGGTCT ACGCTGTCAT CCTGTCCAGT
1861GAGTTCTGGC CGCCCTTCAA GGACGAGAAG CTGGAGGTCC CCGAGGATAT CAGGGCAGCC
1921CTGGAGGCTT ACTGCAAGAA GTATGAGCAG CTCAAGGCCA TGCGGACCCT CAGTTGGAAG
1981CACACCCTGG GCCTGGTGAC CATGGACGTG GAGCTGGCCG ACCGCACGCT GTCTGTGGCG
2041GTCACCCCAG TACAGGCGGT GATCTTGCTG TATTTTCAGG ACCAAGCCAG CTGGACCCTG
2101GAGGAACTGA GCAAGGCGGT GAAGATGCCC GTGGCGCTGC TGCGGCGGCG GATGTCCGTG
2161TGGCTGCAGC AGGGTGTGCT GCGTGAGGAG CCCCCCGGCA CCTTCTCTGT CATTGAGGAG
2221GAGCGGCCTC AGGACCGGGA CAACATGGTG CTCATTGACA GTGACGACGA GAGCGACTCC
2281GGCATGGCCT CCCAGGCCGA CCAGAAGGAG GAGGAGCTGC TGCTCTTCTG GACGTACATC
2341CAGGCCATGC TGACCAACCT GGAGAGCCTC TCACTGGATC GTATCTACAA CATGCTCCGC
2401ATGTTTGTGG TGACTGGGCC TGCACTGGCC GAGATTGACC TGCAGGAGCT GCAGGGCTAC
2461CTGCAGAAGA AGGTGCGGGA CCAGCAGCTC GTCTACTCGG CCGGCGTCTA CCGCCTGCCC
2521ACGAACTGCA GCTGCCCAAC TTTGTTGTAC AAAGTtggca ttataagaaa gcattgctta
2581tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)

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