Construct: ORF ccsbBroadEn_08173

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012973.1_s300c1, BRDN0000457312
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZBTB21 (49854)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 49854 ZBTB21 zinc finger and BTB domain ... NM_001098402.2 99.9% 99.9% 2881T>C
2 human 49854 ZBTB21 zinc finger and BTB domain ... NM_001320731.2 99.9% 99.9% 2881T>C
3 human 49854 ZBTB21 zinc finger and BTB domain ... NM_020727.5 99.9% 99.9% 2881T>C
4 human 49854 ZBTB21 zinc finger and BTB domain ... XM_005261121.3 99.9% 99.9% 2881T>C
5 human 49854 ZBTB21 zinc finger and BTB domain ... XM_011529588.2 99.9% 99.9% 2881T>C
6 human 49854 ZBTB21 zinc finger and BTB domain ... XM_011529590.2 99.9% 99.9% 2881T>C
7 human 49854 ZBTB21 zinc finger and BTB domain ... XM_017028360.1 99.9% 99.9% 2881T>C
8 human 49854 ZBTB21 zinc finger and BTB domain ... XM_017028361.1 99.9% 99.9% 2881T>C
9 human 49854 ZBTB21 zinc finger and BTB domain ... NM_001098403.2 81.1% 81% 1602_1603ins603;2278T>C
10 human 49854 ZBTB21 zinc finger and BTB domain ... NM_001320729.2 81.1% 81% 1602_1603ins603;2278T>C
11 mouse 114565 Zbtb21 zinc finger and BTB domain ... NM_001081684.2 82.5% 86.2% (many diffs)
12 mouse 114565 Zbtb21 zinc finger and BTB domain ... XM_006522860.3 82.5% 86.2% (many diffs)
13 mouse 114565 Zbtb21 zinc finger and BTB domain ... NM_175428.4 80.4% 84% (many diffs)
14 mouse 114565 Zbtb21 zinc finger and BTB domain ... XM_006522857.3 80.4% 84% (many diffs)
15 mouse 114565 Zbtb21 zinc finger and BTB domain ... XM_006522858.3 80.4% 84% (many diffs)
16 mouse 114565 Zbtb21 zinc finger and BTB domain ... XM_017316853.1 80.4% 84% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3267
ORF length:
3198
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGAGGGATTA CTGCATTACA TCAACCCTGC ACACGCCATT TCTCTCCTAA
121GTGCCCTGAA TGAGGAGCGT CTCAAAGGAC AGCTGTGTGA TGTGCTGCTG ATTGTTGGAG
181ACCAAAAGTT CCGAGCTCAT AAAAACGTCT TGGCTGCCAG CAGCGAATAC TTTCAGAGTT
241TATTCACAAA TAAGGAAAAT GAGTCACAAA CTGTATTTCA GCTTGACTTC TGTGAGCCAG
301ATGCTTTTGA TAATGTTTTA AACTACATTT ATTCTTCCTC TCTATTTGTT GAGAAGAGCA
361GCCTTGCTGC TGTGCAAGAA CTTGGCTATA GTCTTGGGAT TTCCTTTCTG ACTAACATCG
421TTTCTAAAAC ACCTCAAGCC CCCTTTCCAA CGTGTCCTAA TAGAAAAAAA GTGTTTGTAG
481AAGATGATGA AAACAGTTCT CAAAAGAGAA GTGTCATTGT TTGTCAAAGT AGAAACGAAG
541CGCAAGGAAA AACTGTTAGT CAAAATCAAC CCGATGTAAG CCATACTTCC CGGCCCTCTC
601CTAGCATTGC AGTCAAGGCC AATACCAATA AGCCACATGT CCCAAAACCA ATAGAACCAC
661TTCATAATTT GTCATTAACT GAAAAGAGTT GGCCGAAAGA TAGTTCTGTG GTATATGCAA
721AGTCTCTTGA GCATTCTGGA TCTTTGGATG ATCCTAATAG AATCAGTTTG GTGAAAAGAA
781ATGCAGTGTT GCCTTCAAAG CCTCTGCAAG ACAGAGAAGC TATGGATGAT AAACCAGGTG
841TGAGTGGTCA GCTTCCAAAA GGAAAAGCTC TAGAGCTGGC TTTGAAGAGA CCACGGCCAC
901CTGTTTTGTC TGTTTGTAGC TCATCAGAGA CTCCCTATCT ATTAAAAGAA ACTAACAAAG
961GAAATGGTCA AGGTGAAGAT AGAAACTTGT TGTACTATTC AAAGTTAGGC TTAGTGATCC
1021CATCCAGTGG ATCTGGTTCT GGAAACCAAA GCATTGACAG GAGTGGCCCA CTTGTTAAGA
1081GTCTCCTCAG ACGGTCATTG TCGATGGATA GCCAGGTTCC TGTCTATTCA CCTTCCATAG
1141ATTTGAAATC TTCCCAGGGA TCATCTTCGG TGTCCAGTGA TGCACCAGGG AATGTGTTGT
1201GTGCTTTATC TCAGAAGTCA TCTTTAAAAG ATTGTAGTGA AAAAACAGCC CTAGATGACA
1261GGCCTCAAGT GCTACAACCG CATCGCCTCA GGTCCTTTAG TGCTTCTCAG TCAACAGACA
1321GGGAGGGAGC TTCCCCTGTG ACTGAGGTGC GCATAAAGAC TGAGCCCAGC AGCCCGCTGT
1381CGGACCCCTC GGACATCATC CGCGTCACTG TGGGAGATGC GGCAACAACA GCAGCTGCCT
1441CATCTTCGTC GGTCACAAGA GACCTGTCTC TGAAAACAGA AGATGACCAA AAAGACATGA
1501GCAGACTCCC AGCAAAAAGG AGGTTCCAAG CGGACCGAAG ATTGCCGTTT AAGAAGTTAA
1561AGGTGAATGA GCACGGGTCT CCTGTGTCAG AAGATAATTT TGAGGAAGGC TCAAGCCCTA
1621CTCTCCTTGA TGCAGATTTT CCAGATTCTG ATTTGAATAA AGACGAATTT GGTGAGTTGG
1681AGGGGACGAG ACCAAACAAA AAATTTAAAT GCAAACATTG CCTTAAGATC TTTAGATCAA
1741CAGCAGGTCT TCACCGTCAT GTTAACATGT ACCATAACCC AGAAAAGCCC TACGCTTGTG
1801ACATCTGTCA CAAGAGGTTT CACACCAACT TCAAAGTGTG GACACACTGT CAGACCCAAC
1861ACGGCATAGT GAAGAACCCA TCACCAGCCT CTAGTTCACA TGCTGTTTTG GATGAAAAAT
1921TCCAAAGAAA GCTGATTGAC ATAGTGAGAG AGAGAGAAAT TAAGAAGGCC CTGATCATTA
1981AGTTAAGGCG CGGCAAGCCT GGTTTTCAGG GACAGAGTAG CTCCCAAGCA CAGCAAGTCA
2041TCAAGAGGAA CTTGAGATCT CGAGCCAAAG GAGCTTACAT TTGTACTTAC TGCGGAAAAG
2101CGTACCGCTT TCTCTCTCAA TTTAAGCAGC ATATAAAAAT GCATCCAGGA GAAAAACCCC
2161TTGGAGTAAA TAAAGTTGCT AAACCAAAAG AGCATGCTCC TCTTGCAAGT CCAGTAGAAA
2221ACAAGGAGGT TTACCAGTGC CGCCTCTGTA ATGCTAAGCT CTCTTCTCTC CTAGAGCAAG
2281GAAGCCACGA GCGGCTGTGC CGGAACGCGG CCGTCTGCCC TTACTGCAGC CTCAGGTTTT
2341TCTCGCCCGA GCTGAAGCAA GAACACGAGA GCAAGTGTGA GTATAAGAAG CTGACCTGCC
2401TCGAGTGCAT GCGCACCTTC AAGTCCTCTT TCAGCATCTG GCGGCACCAG GTTGAAGTCC
2461ATAATCAGAA CAACATGGCA CCCACCGAAA ACTTTTCTTT GCCCGTTTTG GACCACAATG
2521GTGATGTGAC TGGTTCTTCA AGGCCCCAAT CCCAGCCTGA GCCCAACAAA GTAAACCACA
2581TCGTCACCAC AAAAGACGAC AACGTGTTCA GTGATTCTTC AGAACAAGTT AACTTCGACT
2641CGGAAGATTC CTCTTGTCTT CCCGAAGACC TTAGTCTTTC CAAGCAACTG AAAATCCAAG
2701TCAAAGAGGA GCCTGTGGAG GAGGCTGAAG AAGAGGCACC CGAGGCCAGC ACAGCCCCCA
2761AAGAAGCGGG TCCTAGCAAA GAAGCCAGCC TGTGGCCCTG CGAGAAGTGT GGGAAGATGT
2821TCACGGTGCA TAAGCAGCTG GAGCGTCACC AGGAGCTTCT GTGCTCTGTG AAACCATTTA
2881TTTGTCACGT GTGCAACAAA GCTTTTCGCA CTAATTTTCG ACTCTGGAGT CACTTCCAAT
2941CGCACATGCC TCAGGCTTCA GAGGAATCGG CACATAAGGA ATCTGAGGTG TGCCCTGTTC
3001CCACAAACTC TCCCTCTCCA CCACCTCTGC CACCGCCACC ACCACTGCCC AAGATCCAGC
3061CTCTGGAGCC TGACAGCCCC ACAGGCCTGT CCGAAAACCC AACTCCAGCC ACAGAAAAAC
3121TGTTTGTGCC CCAAGAATCA GACACCCTTT TTTACCATGC CCCACCCCTT TCAGCAATCA
3181CATTTAAAAG ACAGTTTATG TGTAAACTTT GCCACAGGAC ATTCAAGACT GCATTTAGTC
3241TTTGGAGTCA CGAACAAACA CACAATTTGC CAACTTTCTT GTACAAAGTT GGcattataa
3301gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)