Construct: ORF ccsbBroadEn_08875

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007597.1_s300c1, BRDN0000457091
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MARCHF7 (64844)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64844 MARCHF7 membrane associated ring-CH... NM_001282805.2 99.9% 100% 651C>T;1467T>C
2 human 64844 MARCHF7 membrane associated ring-CH... NM_022826.4 99.9% 100% 651C>T;1467T>C
3 human 64844 MARCHF7 membrane associated ring-CH... XM_005246773.2 99.9% 100% 651C>T;1467T>C
4 human 64844 MARCHF7 membrane associated ring-CH... XM_005246774.1 97.1% 94.3% (many diffs)
5 human 64844 MARCHF7 membrane associated ring-CH... XM_017004718.2 97.1% 94.3% (many diffs)
6 human 64844 MARCHF7 membrane associated ring-CH... NM_001282807.2 93.6% 91.9% (many diffs)
7 human 64844 MARCHF7 membrane associated ring-CH... XM_017004719.1 91.9% 92% 346_347ins168;483C>T;1299T>C
8 human 64844 MARCHF7 membrane associated ring-CH... XM_017004720.1 91.9% 92% 346_347ins168;483C>T;1299T>C
9 human 64844 MARCHF7 membrane associated ring-CH... NM_001282806.1 89.2% 86.4% (many diffs)
10 human 64844 MARCHF7 membrane associated ring-CH... XM_017004721.1 89.2% 86.4% (many diffs)
11 human 64844 MARCHF7 membrane associated ring-CH... XR_001738901.2 60.2% (many diffs)
12 human 64844 MARCHF7 membrane associated ring-CH... XR_427106.1 59.3% (many diffs)
13 human 64844 MARCHF7 membrane associated ring-CH... XR_922987.2 57.9% (many diffs)
14 human 64844 MARCHF7 membrane associated ring-CH... XR_001738902.1 54.6% (many diffs)
15 mouse 57438 March7 membrane-associated ring fi... NM_020575.2 85.4% 83.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2181
ORF length:
2112
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGAGTCTAAA CCTTCAAGGA TTCCAAGAAG AATTTCTGTT CAACCTTCCA
121GCTCCTTAAG TGCTAGGATG ATGTCTGGAA GCAGAGGAAG TAGTTTAAAT GATACCTATC
181ACTCAAGAGA CTCTTCATTT AGATTGGATT CTGAATATCA GTCTACATCA GCATCAGCAT
241CTGCGTCACC ATTTCAATCT GCATGGTATA GTGAATCTGA GATAACTCAG GGAGCACGCT
301CAAGATCGCA GAACCAGCAA CGGGATCATG ATTCAAAAAG ACCTAAACTT TCCTGTACAA
361ACTGTACTAC CTCAGCTGGG AGAAATGTTG GAAATGGTTT AAACACATTA TCAGATTCAT
421CTTGGAGGCA TAGTCAAGTT CCTAGATCTT CATCAATGGT ACTTGGATCA TTTGGAACAG
481ACTTAATGAG AGAGAGGAGA GATTTGGAGA GAAGAACAGA TTCCTCTATT AGTAATCTTA
541TGGATTATAG TCACCGAAGT GGTGATTTCA CAACTTCATC ATATGTTCAA GACAGAGTTC
601CTTCATATTC ACAAGGAGCA AGACCAAAAG AAAACTCAAT GAGCACTTTA CAGTTGAATA
661CATCATCCAC AAACCACCAA TTGCCTTCTG AACATCAGAC CATACTAAGT TCTAGGGATT
721CCAGAAATTC TTTAAGATCA AATTTTTCTT CAAGAGAATC AGAATCTTCC CGAAGCAATA
781CGCAGCCTGG ATTTTCTTAC AGTTCAAGTA GAGATGAAGC CCCAATCATA AGCAATTCAG
841AAAGGGTTGT TTCATCTCAA AGACCATTTC AAGAATCTTC TGACAATGAA GGTAGGCGGA
901CAACGAGGAG ATTGCTGTCA CGCATAGCTT CTAGCATGTC ATCTACTTTT TTTTCACGAA
961GATCTAGTCA GGATTCCTTG AATACAAGAT CATTGAATTC TGAAAATTCT TACGTTTCTC
1021CAAGAATCTT GACAGCTTCA CAGTCCCGTA GTAATGTACC ATCAGCTTCT GAAGTTCCCG
1081ATAATAGGGC ATCTGAAGCT TCTCAGGGAT TTCGATTTCT TAGGCGAAGA TGGGGTTTGT
1141CATCTCTTAG CCACAATCAT AGCTCTGAGT CAGATTCAGA AAATTTTAAC CAAGAATCTG
1201AAGGTAGAAA TACAGGACCA TGGTTATCTT CCTCACTTAG AAATAGATGC ACACCTTTGT
1261TCTCTAGAAG GAGGCGAGAG GGAAGAGATG AATCTTCAAG GATACCTACC TCTGATACAT
1321CATCTAGATC TCATATTTTT AGAAGAGAAT CAAATGAAGT GGTTCACCTT GAAGCACAGA
1381ATGATCCTCT TGGAGCTGCT GCCAACAGAC CACAAGCATC TGCAGCATCA AGCAGTGCCA
1441CAACAGGTGG CTCTACATCA GATTCGGCTC AAGGTGGAAG AAATACAGGA ATATCAGGGA
1501TTCTTCCTGG TTCCTTATTC CGGTTTGCAG TCCCCCCAGC ACTTGGGAGT AATTTGACCG
1561ACAATGTCAT GATCACAGTA GATATTATTC CTTCAGGTTG GAATTCAGCT GATGGTAAAA
1621GTGATAAAAC TAAAAGTGCG CCTTCAAGAG ATCCAGAAAG ATTGCAGAAA ATAAAAGAGA
1681GCCTCCTTTT AGAGGACTCA GAAGAAGAAG AAGGTGACTT ATGTAGAATT TGTCAAATGG
1741CAGCTGCATC ATCATCTAAT TTGCTGATAG AGCCATGCAA GTGCACAGGA AGTTTGCAGT
1801ATGTCCACCA AGACTGTATG AAAAAGTGGT TACAGGCCAA AATTAACTCT GGTTCTTCAT
1861TAGAAGCTGT AACCACCTGT GAACTATGTA AAGAGAAGTT GGAGCTTAAC CTGGAGGATT
1921TTGATATTCA TGAACTACAT AGAGCTCATG CAAATGAACA AGCTGAGTAT GAGTTTATCA
1981GCTCTGGTCT CTACCTAGTG GTGTTATTGC ACTTGTGCGA ACAAAGCTTT TCTGATATGA
2041TGGGAAATAC AAATGAACCA AGCACACGTG TCCGATTTAT TAACCTTGCA AGAACTCTTC
2101AGGCACATAT GGAAGATCTC GAAACTTCAG AGGATGATTC CGAAGAAGAC GGAGACCATA
2161ACAGGACATT TGATATTGCC TTGCCAACTT TCTTGTACAA AGTTGGcatt ataagaaagc
2221attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)