Construct: ORF ccsbBroadEn_09125

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001236.1_s300c1, BRDN0000396355
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MRO (83876)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 83876 MRO maestro NM_001369508.2 99.5% 99.1% 117G>C;400A>G;429C>T
2 human 83876 MRO maestro NM_001369510.2 99.5% 99.1% 117G>C;400A>G;429C>T
3 human 83876 MRO maestro NM_031939.6 99.5% 99.1% 117G>C;400A>G;429C>T
4 human 83876 MRO maestro XM_017026035.2 99.5% 99.1% 117G>C;400A>G;429C>T
5 human 83876 MRO maestro NM_001127176.3 88.3% 80.2% (many diffs)
6 human 83876 MRO maestro NM_001127174.3 78.6% 78.2% (many diffs)
7 human 83876 MRO maestro NM_001369511.2 78.6% 78.2% (many diffs)
8 human 83876 MRO maestro NM_001369515.2 78.6% 78.2% (many diffs)
9 human 83876 MRO maestro XM_011526226.3 78.6% 78.2% (many diffs)
10 human 83876 MRO maestro NM_001127175.3 68.8% 61.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
810
ORF length:
744
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA CCAAAGACAG AGGAGAATCC TGGGCCAGCC CCTTTCCATC CCTACTTCCC
121AGCCCAAGCA GAAAAGGACA TCAATGATAT CTTTCTTTTC CAAGGTCTCT TGGAAACTGA
181GCTTCCAGAA GCGGGAGCCT CTGAAGAATG TGTTTTTCAT CTTGGCAGAA AGAGCTCGGG
241ACCCCAGTGC TAAAAAGCGT CACATGGCAA TGAGAAACTT GGGAACCATG GCCTATGAAG
301CCCCTGACAA GGTGAGAAAG TATAAGAAAA TTGTCCTCGA CCTGCTGGTG TATGGACTGT
361ATGACCCTGT GAATTTGGAA GTCATCCATG AGAGTATGAA GACTCTGACC GTCGTTCTGG
421GCAAGATCCA GGGGAAAGGT TTGGGTTCCT TCTTCATAGA TATCGCCCTT CAGACCAGGA
481CTTTATTAGA TGATGAGAAC GACAGTCTGA GATACTCGGC CTTTGTTTTG TTTGGGCAAT
541TGGCTGCCTT TGCCGGGAGG AAATGGAAAA AATTTTTCAC CAGTCAGGTT AAGCAGACAC
601GAGATTCCCT CCTGATCCAT TTACAGGACA GAAATCCCCA GGTTGCCAAG GCTTGCAAAA
661CAACATTTCA AGCCTGTTCT CCATATCTGA AACTAAAGGA GGAATACAGC TTCCAGAGTG
721AAGAAGATCA AAGGAACACT AAGCTCTACC AGCAGCTGAG CCACTATCAT CCAGAGATCC
781TGCAGTTCTT CTACGCAAAT AAAATTCTGT ACCCAACTTT CTTGTACAAA GTtggcatta
841taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)