Construct: ORF ccsbBroadEn_09713

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005673.1_s300c1, BRDN0000455819
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FBXO16 (157574)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 157574 FBXO16 F-box protein 16 NM_172366.4 99.8% 100% 594T>C
2 human 157574 FBXO16 F-box protein 16 NM_001258211.1 95.7% 95.8% 97_98ins36;558T>C
3 mouse 50759 Fbxo16 F-box protein 16 XM_006519230.3 82.7% 85.2% (many diffs)
4 mouse 50759 Fbxo16 F-box protein 16 XM_006519231.3 82% 84.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
945
ORF length:
876
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GATGGCATTT GCACCTCCAA AAAACACAGA TGGTCCCAAA ATGCAGACAA
121AGATGAGCAC CTGGACACCC CTAAACCATC AGCTATTGAA TGACCGGGTA TTTGAAGAAA
181GAAGAGCCCT GCTTGGCAAA TGGTTTGACA AATGGACAGA CTCTCAAAGA AGAAGAATCC
241TCACAGGCCT GTTGGAGCGC TGCTCGCTGT CCCAGCAAAA GTTCTGCTGT CGAAAGCTTC
301AAGAGAAAAT TCCAGCAGAA GCCCTGGACT TTACAACCAA GCTTCCAAGG GTGTTATCTT
361TATACATCTT TTCTTTCCTG GACCCTCGGA GCCTTTGTCG TTGTGCACAG GTGTGCTGGC
421ATTGGAAGAA CCTTGCTGAG CTGGACCAGC TCTGGATGCT GAAATGTTTA CGGTTTAACT
481GGTACATCAA TTTCTCTCCA ACTCCCTTTG AGCAGGGGAT CTGGAAGAAG CACTATATTC
541AAATGGTGAA AGAACTTCAT ATTACCAAGC CTAAGACACC CCCAAAGGAT GGATTTGTAA
601TCGCTGACGT TCAACTAGTT ACAAGCAATT CTCCAGAGGA AAAACAGTCC CCTTTATCAG
661CCTTTCGGTC CTCTTCCTCT TTAAGAAAGA AGAATAACTC AGGGGAGAAA GCACTTCCAC
721CCTGGCGATC TTCTGATAAG CACCCAACAG ATATCATTCG TTTTAATTAC CTAGACAACC
781GTGACCCCAT GGAGACTGTC CAGCAAGGAA GAAGAAAAAG AAACCAAATG ACCCCAGACT
841TCAGCCGACA GTCACATGAT AAGAAAAATA AATTGCAGGA CAGAACTAGG CTAAGAAAAG
901CACAATCAAT GATGTCGAGG AGAAATCCCT TCCCACTATG TCCCTTGCCA ACTTTCTTGT
961ACAAAGTTGG cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)