Construct: ORF ccsbBroadEn_09792

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012253.1_s300c1, BRDN0000457265
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANO6 (196527)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 196527 ANO6 anoctamin 6 NM_001025356.3 99.9% 99.8% 2509T>C
2 human 196527 ANO6 anoctamin 6 XM_005268706.5 98.2% 97.4% (many diffs)
3 human 196527 ANO6 anoctamin 6 NM_001142678.2 97.8% 96.9% (many diffs)
4 human 196527 ANO6 anoctamin 6 NM_001204803.2 97.7% 97.6% 70_132del;2572T>C
5 human 196527 ANO6 anoctamin 6 XM_005268707.4 96.3% 92.9% 0_1insATGAAAAAGATGAGCAGGA;51_52ins80;2410T>C
6 human 196527 ANO6 anoctamin 6 NM_001142679.2 90.6% 87.3% (many diffs)
7 mouse 105722 Ano6 anoctamin 6 NM_175344.4 83.2% 90.1% (many diffs)
8 mouse 105722 Ano6 anoctamin 6 XM_006520234.2 82.2% 88.8% (many diffs)
9 mouse 105722 Ano6 anoctamin 6 XM_006520233.3 82.2% 87.6% (many diffs)
10 mouse 105722 Ano6 anoctamin 6 XM_006520232.3 81.8% 87.6% (many diffs)
11 mouse 105722 Ano6 anoctamin 6 XM_006520231.3 81.7% 87.7% (many diffs)
12 mouse 105722 Ano6 anoctamin 6 NM_001253813.1 81.4% 88.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2799
ORF length:
2730
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAAAAAGATG AGCAGGAATG TTTTGCTACA AATGGAGGAG GAGGAGGACG
121ACGACGATGG GGATATCGTG TTGGAAAACC TTGGACAGAC AATTGTCCCC GATTTGGGAT
181CACTGGAAAG TCAGCATGAT TTTCGAACCC CGGAGTTTGA AGAATTTAAT GGAAAACCTG
241ACTCCCTCTT TTTTAATGAT GGCCAGCGAA GAATTGACTT TGTTCTAGTA TATGAGGATG
301AAAGCAGAAA AGAGACCAAT AAAAAGGGTA CAAATGAAAA ACAAAGGAGG AAAAGACAAG
361CATACGAATC TAACCTTATC TGTCATGGCC TGCAGTTAGA AGCAACAAGA TCAGTATTGG
421ATGACAAGCT TGTATTTGTA AAAGTACACG CACCATGGGA GGTGTTATGT ACGTATGCTG
481AGATAATGCA CATCAAATTG CCTCTGAAAC CCAATGATCT GAAAAACCGG TCCTCAGCCT
541TTGGTACACT CAACTGGTTT ACCAAAGTCC TCAGTGTAGA CGAAAGCATC ATCAAGCCAG
601AGCAAGAGTT TTTCACTGCC CCATTTGAGA AGAACCGGAT GAATGATTTT TACATAGTTG
661ATAGAGATGC TTTCTTCAAT CCAGCCACCA GAAGCCGCAT TGTTTACTTC ATCCTCTCTC
721GGGTCAAGTA TCAAGTGATA AACAATGTTA GCAAGTTTGG GATCAACAGA CTTGTAAACT
781CTGGGATCTA CAAGGCAGCT TTCCCACTCC ATGATTGCAA ATTCCGCCGT CAGTCAGAGG
841ATCCCAGCTG CCCTAATGAA CGGTACCTTC TGTACAGAGA ATGGGCTCAT CCTCGAAGCA
901TATACAAAAA GCAGCCCTTG GATCTTATCA GGAAATACTA TGGAGAGAAG ATTGGAATCT
961ACTTTGCTTG GCTGGGCTAT TACACTCAGA TGCTTCTCCT GGCCGCAGTT GTAGGAGTGG
1021CTTGCTTTCT CTATGGATAT CTTAATCAAG ATAACTGTAC ATGGAGCAAA GAAGTTTGTC
1081ATCCTGATAT TGGTGGCAAG ATCATAATGT GTCCTCAGTG TGATAGGCTT TGTCCATTCT
1141GGAAACTCAA TATTACTTGC GAGTCCTCAA AGAAATTGTG CATCTTCGAC AGTTTTGGAA
1201CCCTGGTCTT TGCAGTATTT ATGGGAGTAT GGGTTACCTT GTTTTTGGAG TTTTGGAAGC
1261GACGCCAGGC AGAACTTGAG TATGAATGGG ATACTGTTGA GTTACAGCAG GAAGAACAAG
1321CCCGACCAGA ATACGAAGCA CGATGTACTC ACGTAGTGAT AAATGAGATT ACTCAGGAAG
1381AAGAACGCAT TCCCTTTACT GCCTGGGGAA AATGTATACG GATAACCCTC TGTGCCAGTG
1441CTGTCTTTTT CTGGATCCTA TTGATCATCG CTTCAGTTAT TGGGATCATT GTCTATAGGC
1501TCTCGGTGTT CATTGTATTT TCTGCAAAAC TTCCCAAGAA CATTAATGGA ACAGACCCAA
1561TCCAGAAATA CCTGACTCCA CAGACAGCCA CGTCCATCAC GGCCTCCATC ATCAGCTTTA
1621TAATTATCAT GATTCTGAAC ACCATATATG AAAAAGTGGC AATTATGATT ACTAACTTCG
1681AACTCCCAAG GACCCAGACT GATTATGAGA ACAGCCTCAC CATGAAGATG TTCTTATTCC
1741AGTTTGTCAA CTACTACTCT TCATGCTTCT ACATAGCATT CTTTAAGGGC AAATTTGTAG
1801GCTATCCAGG AGACCCAGTT TATTGGTTGG GAAAATACAG AAATGAAGAG TGTGACCCAG
1861GTGGCTGTCT TCTTGAACTG ACAACTCAGC TGACAATAAT CATGGGAGGA AAAGCAATCT
1921GGAATAACAT ACAAGAAGTA TTATTGCCCT GGATCATGAA TCTAATTGGG CGATTTCACA
1981GAGTTTCTGG ATCAGAAAAG ATAACCCCAC GATGGGAACA GGACTACCAT CTGCAGCCTA
2041TGGGCAAACT GGGATTATTT TATGAATATC TTGAAATGAT TATTCAGTTT GGGTTCGTCA
2101CCTTATTTGT GGCCTCTTTT CCACTGGCCC CTCTGTTGGC TCTCGTGAAC AATATATTGG
2161AAATAAGAGT GGACGCATGG AAACTGACCA CCCAGTTTAG ACGCCTGGTA CCAGAGAAAG
2221CCCAAGACAT TGGAGCATGG CAGCCCATCA TGCAAGGAAT AGCAATTCTG GCTGTGGTGA
2281CCAATGCCAT GATCATAGCT TTCACGTCGG ACATGATCCC CCGCCTAGTG TACTACTGGT
2341CCTTCTCCGT CCCTCCCTAC GGGGACCACA CTTCCTACAC CATGGAAGGG TACATCAACA
2401ACACTCTCTC CATCTTCAAA GTCGCAGACT TCAAAAACAA AAGCAAGGGA AACCCGTACT
2461CTGACCTGGG TAACCATACC ACATGCAGGT ATCGTGATTT CCGATACCCA CCTGGACACC
2521CCCAGGAGTA TAAACACAAC ATCTACTATT GGCATGTGAT TGCAGCCAAG CTGGCTCTTA
2581TCATTGTCAT GGAGCACGTC ATCTACTCTG TGAAATTTTT CATTTCATAT GCAATTCCCG
2641ATGTATCAAA ACGCACAAAG AGCAAGATCC AGAGAGAAAA ATACCTAACC CAAAAGCTTC
2701TTCATGAGAA TCACCTCAAA GATATGACGA AAAATATGGG GGTGATAGCT GAGCGGATGA
2761TAGAAGCAGT AGATAACAAT TTACGGCCAA AATCAGAATT GCCAACTTTC TTGTACAAAG
2821TTGGcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)

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