Construct: ORF ccsbBroadEn_09870

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015800.1_s300c1, BRDN0000389180
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AK9 (221264)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 221264 AK9 adenylate kinase 9 NM_001329602.1 99.9% 100% 681T>C
2 human 221264 AK9 adenylate kinase 9 NM_145025.4 99.9% 100% 681T>C
3 human 221264 AK9 adenylate kinase 9 NM_001329603.1 85.3% 85.3% 1_216del;897T>C
4 human 221264 AK9 adenylate kinase 9 XM_011535559.3 39.6% 39.4% (many diffs)
5 human 221264 AK9 adenylate kinase 9 NR_138057.1 38.8% (many diffs)
6 human 221264 AK9 adenylate kinase 9 XM_017010388.2 31% 30.9% (many diffs)
7 human 221264 AK9 adenylate kinase 9 XM_011535556.3 29.2% 29.1% (many diffs)
8 human 221264 AK9 adenylate kinase 9 XM_011535555.2 25.8% 25.7% (many diffs)
9 human 221264 AK9 adenylate kinase 9 XM_017010386.1 24.8% 24.7% (many diffs)
10 human 221264 AK9 adenylate kinase 9 XM_017010384.1 24.6% 24.5% (many diffs)
11 human 221264 AK9 adenylate kinase 9 NM_001145128.2 22% 21.9% (many diffs)
12 human 221264 AK9 adenylate kinase 9 XM_011535552.3 21.9% 21.8% (many diffs)
13 human 221264 AK9 adenylate kinase 9 XM_011535553.3 21.9% 21.8% (many diffs)
14 human 221264 AK9 adenylate kinase 9 XM_006715376.3 21.2% 21.1% (many diffs)
15 human 221264 AK9 adenylate kinase 9 XM_011535550.2 21.1% 21% (many diffs)
16 human 221264 AK9 adenylate kinase 9 XM_024446350.1 21.1% 21% (many diffs)
17 human 221264 AK9 adenylate kinase 9 XR_942337.2 20.7% (many diffs)
18 human 221264 AK9 adenylate kinase 9 XM_011535554.2 20.5% 17.6% (many diffs)
19 human 221264 AK9 adenylate kinase 9 XM_017010385.2 10.7% 10.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1329
ORF length:
1263
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC TTCTCAAGAG AAGACAGAAG AGTATCCTTT TGCAGATATA TTTGATGAAG
121ATGAAACTGA AAGGAATTTT TTGTTGTCCA AACCTGTTTG CTTTGTTGTA TTTGGGAAAC
181CAGGTGTTGG GAAAACAACA TTAGCCCGTT ACATAACACA GGCATGGAAA TGTATTCGTG
241TTGAAGCTTT GCCAATTTTA GAAGAACAGA TTGCTGCTGA AACCGAATCA GGAGTTATGT
301TGCAATCAAT GTTGATCAGC GGTCAAAGCA TTCCAGATGA ACTTGTCATA AAGCTAATGT
361TGGAGAAGCT CAACTCCCCA GAAGTCTGTC ACTTTGGTTA TATTATCACT GAAATACCAT
421CACTTTCACA GGATGCCATG ACTACCTTAC AGCAAATAGA ATTAATTAAA AACTTAAACC
481TGAAACCTGA TGTTATAATC AATATAAAGT GTCCTGACTA TGATTTGTGC CAGAGAATTT
541CTGGGCAAAG ACAGCACAAT AATACGGGAT ACATATACAG TAGAGACCAG TGGGATCCTG
601AAGTCATTGA GAATCATAGG AAAAAGAAGA AAGAAGCCCA AAAGGACGGA AAAGGAGAAG
661AGGAAGAAGA GGAAGAAGAG CAAGAAGAAG AAGAGGCATT TATTGCCGAA ATGCAGATGG
721TGGCTGAAAT TCTTCATCAT CTAGTCCAGA GGCCTGAAGA TTATTTGGAA AATGTTGAAA
781ACATTGTTAA GCTTTATAAG GAAACAATTC TCCAAACTTT AGAAGAAGTA ATGGCTGAAC
841ACAATCCCCA GTATCTCATT GAGCTAAATG GAAATAAACC AGCAGAGGAG CTCTTTATGA
901TTGTTATGGA TCGACTTAAA TATCTGAACC TAAAAAGAGC AGCTATTCTA ACCAAACTTC
961AGGGTGCAGA GGAAGAAATT AATGACACAA TGGAAAATGA TGAGCTATTT CGTACTCTTG
1021CATCTTATAA ACTTATTGCA CCAAGATACA GATGGCAAAG AAGTAAATGG GGACGTACAT
1081GTCCTGTGAA TTTAAAAGAT GGTAACATTT ATTCAGGATT ACCAGATTAT TCTGTGAGTT
1141TTCTAGGTAA AATCTACTGT CTTTCATCAG AAGAAGCATT AAAACCATTT TTGTTGAACC
1201CACGTCCCTA TCTGCTTCCA CCTATGCCAG GACCACCATG TAAAGTATTC ATACTTGGAC
1261CTCAATATTC AGGGAAAACA ACACTTTGCA ATATGCTTGC AGAAAATTAC AAAGGAAAGG
1321TGACTAACTA CCCAACTTTC TTGTACAAAG Ttggcattat aagaaagcat tgcttatcaa
1381tttgttgcaa cgaac

Download FASTA (ORF) (Full)

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