Construct: ORF ccsbBroadEn_10184

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000235.1_s300c1, BRDN0000397833
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ASPDH (554235)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 554235 ASPDH aspartate dehydrogenase dom... NM_001024656.3 99.8% 99.4% 482A>G
2 human 554235 ASPDH aspartate dehydrogenase dom... XM_024451585.1 74.7% 70% (many diffs)
3 human 554235 ASPDH aspartate dehydrogenase dom... NM_001114598.2 61.5% 57.9% (many diffs)
4 mouse 68352 Aspdh aspartate dehydrogenase dom... NM_026690.1 52.6% 53.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
600
ORF length:
534
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG GGACAGAGTG AAAGGTAGCA AGTCAAGGCG CCCTGATCTG GTTGTGGAAG
121TGGCCCATCC CAAAATAATC CATGAATCTG GGGCACAAAT CCTGCGCCAT GCCAATCTCC
181TGAGCCTTCG TGTCACCATG GCCACACACC CCGATGGCTT CCGGCTTGAG GGACCCCTGG
241CTGCAGCCCA CAGCCCTGGG CCTTGCACTG TGCTCTACGA AGGCCCTGTC CGTGGGCTCT
301GCCCCTTTGC CCCGCGAAAT TCCAACACCA TGGCGGCGGC TGCCCTGGCT GCCCCCAGCC
361TGGGCTTCGA TGGGGTGATT GGGGTGCTCG TGGCTGATAC CAGCCTCACG GACATGCACG
421TGGTGGATGT AGAGCTGAGC GGACCCCGGG GCCCCACGGG CCGAAGCTTT GCTGTGCACA
481CCCGCAGAGA GAACCCTGCC GAGCCAGGCG CGGTCACCGG CTCCGCCACC GTCACGGCCT
541TCTGGCGGAG CCTCCTGGCC TGCTGCCAGC TCCCCTCCAG GCCGGGGATC CATCTCTGCT
601GCCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
661acgaac

Download FASTA (ORF) (Full)