Construct: ORF ccsbBroadEn_11615

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002154.1_s300c1, BRDN0000390407
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GPR176 (11245)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11245 GPR176 G protein-coupled receptor 176 NM_001271854.2 99.9% 99.8% 230A>G
2 human 11245 GPR176 G protein-coupled receptor 176 NM_007223.3 97.1% 96.5% (many diffs)
3 human 11245 GPR176 G protein-coupled receptor 176 XM_011521167.3 89.6% 84.6% (many diffs)
4 human 11245 GPR176 G protein-coupled receptor 176 XM_011521168.3 89.6% 84.6% (many diffs)
5 human 11245 GPR176 G protein-coupled receptor 176 XM_017021873.2 89.6% 84.6% (many diffs)
6 human 11245 GPR176 G protein-coupled receptor 176 NM_001271855.2 87.7% 86.9% (many diffs)
7 human 11245 GPR176 G protein-coupled receptor 176 XM_017021874.2 68.4% 68.4% 0_1ins486
8 human 11245 GPR176 G protein-coupled receptor 176 XM_017021875.2 68.4% 68.4% 0_1ins486
9 human 11245 GPR176 G protein-coupled receptor 176 XM_017021876.1 68.4% 68.4% 0_1ins486
10 human 11245 GPR176 G protein-coupled receptor 176 XM_017021877.1 68.4% 68.4% 0_1ins486
11 human 11245 GPR176 G protein-coupled receptor 176 XM_017021878.2 68.4% 68.4% 0_1ins486
12 human 11245 GPR176 G protein-coupled receptor 176 XM_024449835.1 68.4% 68.4% 0_1ins486
13 mouse 381413 Gpr176 G protein-coupled receptor 176 NM_201367.3 84.1% 86.6% (many diffs)
14 mouse 381413 Gpr176 G protein-coupled receptor 176 XM_011239648.2 75% 78.4% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1608
ORF length:
1542
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG ACATAACGGG AGCTGGATCT CTCCAAATGC CAGCGAGCCG CACAACGCGT
121CCGGCGCCGA GGCTGCGGGT GTGAACCGCA GCGCGCTCGG GGAGTTCGGC GAGGCGCAGC
181TGTACCGCCA GTTCACCACC ACCGTGCAGG TCGTCATCTT CATAGGCTCG CTGCTCGAGT
241TTGGCAACAT GGAGGTCACT AGAAAACTTG ATAAGAGCAG ACTGCCTGGG ATTAGGTTCA
301TTAAAAACCT GGCCTGCTCG GGGATTTGTG CCAGCCTGGT CTGTGTGCCC TTCGACATCA
361TCCTCAGCAC CAGTCCTCAC TGTTGCTGGT GGATCTACAC CATGCTCTTC TGCAAGGTCG
421TCAAATTTTT GCACAAAGTA TTCTGCTCTG TGACCATCCT CAGCTTCCCT GCTATTGCTT
481TGGACAGGTA CTACTCAGTC CTCTATCCAC TGGAGAGGAA AATATCTGAT GCCAAGTCCC
541GTGAACTGGT GATGTACATC TGGGCCCATG CAGTGGTGGC CAGTGTCCCT GTGTTTGCAG
601TAACCAATGT GGCTGACATC TATGCCACGT CCACCTGCAC GGAAGTCTGG AGCAACTCCT
661TGGGCCACCT GGTGTACGTT CTGGTGTATA ACATCACCAC GGTCATTGTG CCTGTGGTGG
721TGGTGTTCCT CTTCTTGATA CTGATCCGAC GGGCCCTGAG TGCCAGCCAG AAGAAGAAGG
781TCATCATAGC AGCGCTCCGG ACCCCACAGA ACACCATCTC TATTCCCTAT GCCTCCCAGC
841GGGAGGCCGA GCTGCACGCC ACCCTGCTCT CCATGGTGAT GGTCTTCATC TTGTGTAGCG
901TGCCCTATGC CACCCTGGTC GTCTACCAGA CTGTGCTCAA TGTCCCTGAC ACTTCCGTCT
961TCTTGCTGCT CACTGCTGTT TGGCTGCCCA AAGTCTCCCT GCTGGCAAAC CCTGTTCTCT
1021TTCTTACTGT GAACAAATCT GTCCGCAAGT GCTTGATAGG GACCCTGGTG CAACTACACC
1081ACCGGTACAG TCGCCGTAAT GTGGTCAGTA CAGGGAGTGG CATGGCTGAG GCCAGCCTGG
1141AACCCAGCAT ACGCTCGGGT AGCCAGCTCC TGGAGATGTT CCACATTGGG CAGCAGCAGA
1201TCTTTAAGCC CACAGAGGAT GAGGAAGAGA GTGAGGCCAA GTACATTGGC TCAGCTGACT
1261TCCAGGCCAA GGAGATATTT AGCACCTGCC TGGAGGGAGA GCAGGGGCCA CAGTTTGCGC
1321CCTCTGCCCC ACCCCTGAGC ACAGTGGACT CTGTATCCCA GGTGGCACCG GCAGCCCCTG
1381TGGAACCTGA AACATTCCCT GATAAGTATT CCCTGCAGTT TGGCTTTGGG CCTTTTGAGT
1441TGCCTCCTCA GTGGCTCTCA GAGACCCGAA ACAGCAAGAA GCGGCTGCTT CCCCCCTTGG
1501GCAACACCCC AGAAGAGCTG ATCCAGACAA AGGTGCCCAA GGTAGGCAGG GTGGAGCGGA
1561AGATGAGCAG AAACAATAAA GTGAGCATTT TTCCAAAGGT GGATTCCTAC CCAACTTTCT
1621TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)