Construct: ORF ccsbBroadEn_12202

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003993.1_s300c1, BRDN0000389156
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCDC91 (55297)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55297 CCDC91 coiled-coil domain containi... NM_001352086.2 99.9% 99.7% 850G>A
2 human 55297 CCDC91 coiled-coil domain containi... XM_005253415.1 99.9% 99.7% 850G>A
3 human 55297 CCDC91 coiled-coil domain containi... XM_017019574.2 99.9% 99.7% 850G>A
4 human 55297 CCDC91 coiled-coil domain containi... XM_024449039.1 99.9% 99.7% 850G>A
5 human 55297 CCDC91 coiled-coil domain containi... XM_024449035.1 97.7% 97.5% 150_151ins27;823G>A
6 human 55297 CCDC91 coiled-coil domain containi... NM_001352078.2 92.2% 91.6% (many diffs)
7 human 55297 CCDC91 coiled-coil domain containi... NM_001352079.2 92.2% 91.6% (many diffs)
8 human 55297 CCDC91 coiled-coil domain containi... NM_001352080.2 92.2% 91.6% (many diffs)
9 human 55297 CCDC91 coiled-coil domain containi... NM_001352081.2 92.2% 91.6% (many diffs)
10 human 55297 CCDC91 coiled-coil domain containi... NM_018318.5 92.2% 91.6% (many diffs)
11 human 55297 CCDC91 coiled-coil domain containi... XM_005253414.1 92.2% 91.6% (many diffs)
12 human 55297 CCDC91 coiled-coil domain containi... XM_006719104.3 92.2% 91.6% (many diffs)
13 human 55297 CCDC91 coiled-coil domain containi... XM_017019569.1 92.2% 91.6% (many diffs)
14 human 55297 CCDC91 coiled-coil domain containi... XM_024449032.1 92.2% 91.6% (many diffs)
15 human 55297 CCDC91 coiled-coil domain containi... XM_024449033.1 92.2% 91.6% (many diffs)
16 human 55297 CCDC91 coiled-coil domain containi... XM_024449034.1 92.2% 91.6% (many diffs)
17 human 55297 CCDC91 coiled-coil domain containi... XM_024449038.1 91.1% 90.9% 562_563ins108;742G>A
18 human 55297 CCDC91 coiled-coil domain containi... NM_001352082.2 90.2% 89.5% (many diffs)
19 human 55297 CCDC91 coiled-coil domain containi... NM_001352083.2 90.2% 89.5% (many diffs)
20 human 55297 CCDC91 coiled-coil domain containi... XM_017019572.1 90.2% 89.5% (many diffs)
21 human 55297 CCDC91 coiled-coil domain containi... XM_024449036.1 90.2% 89.5% (many diffs)
22 human 55297 CCDC91 coiled-coil domain containi... XM_024449037.1 90.2% 89.5% (many diffs)
23 human 55297 CCDC91 coiled-coil domain containi... NM_001352084.2 86.3% 85.7% (many diffs)
24 human 55297 CCDC91 coiled-coil domain containi... NM_001330367.2 84.1% 83.4% (many diffs)
25 human 55297 CCDC91 coiled-coil domain containi... NM_001352087.2 67.8% 67.6% 0_1ins396;454G>A
26 human 55297 CCDC91 coiled-coil domain containi... XM_011520735.1 67.8% 67.6% 0_1ins396;454G>A
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1299
ORF length:
1233
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC AATGTGGAAT AAAGTATCTG GAGTCCATCT TTCACCATCT TCTCCTGAGA
121TTGTACTGGA CCGTGACCAC TCTTCTTCCA TTGGCTGCCT CTCTTCTGAT GCCATTATTT
181CATCACCAGA GAATACACAT GCAGCAAATA GCATTGTGAG TCAAACTATT CCAAAAGCAC
241AGATTCAGCA ATCAACACAC ACTCATCTGG ATATCTCACT TTTTCCATTG GGTTTAACTG
301ATGAAAAAAG TAATGGAACA ATTGCCCTTG TGGATGATTC TGAGGATCCT GGAGCCAATG
361TATCTAACAT ACAGCTTCAG CAAAAAATTT CAAGTCTGGA GATTAAACTC AAAGTATCTG
421AAGAAGAAAA ACAGAGAATT AAACAGGATG TGGAATCATT GATGGAAAAG CATAATGTCT
481TAGAAAAAGG CTTTCTAAAA GAAAAAGAGC AAGAGGCCAT TTCTTTTCAA GATAGATACA
541AAGAACTTCA GGAAAAACAT AAACAAGAAT TGGAAGACAT GAGGAAAGCT GGTCACGAAG
601CCCTCAGCAT TATTGTGGAT GAATATAAGG CACTACTGCA GTCTTCAGTT AAGCAACAAG
661TAGAAGCTAT TGAAAAACAG TACATTTCTG CAATTGAGAA ACAGGCACAC AAGTGTGAGG
721AGTTGCTAAA TGCTCAGCAT CAGAGGCTCC TTGAAATGCT AGATACAGAG AAGGAACTGT
781TAAAAGAAAA AATAAAGGAA GCTTTGATTC AGCAATCTCA AGAACAGAAG GAAATATTGG
841AAAAGTGTTT GGAGGAAGAA AGGCAAAGAA ATAAAGAGGC ATTAGTATCC GCTGCAAAGC
901TTGAAAAAGA AGCAATGAAG GATGCAGTTT TAAAAGTCGT AGAAGAAGAA AGAAAAAATT
961TAGAAAAAGC GCATGCTGAA GAAAGGGAAT TATGGAAGAC AGAACATGCA AAAGATCAAG
1021AAAAAGTATC TCAGGAAATT CAAAAAGCTA TACAAGAACA AAGAAAAATA AGTCAGGAAA
1081CTGTTAAGGC AGCAATAATA GAAGAGCAGA AACGAAGTGA AAAGGCTGTG GAAGAGGCAG
1141TGAAAAGAAC AAGAGATGAA TTGATAGAGT ATATAAAAGA ACAGAAAAGG CTCGATCAAG
1201TCATCCGCCA AAGAAGCCTG TCCAGTTTGG AACTGTTCCT CTCCTGTGCA CAGAAACAGT
1261TAAGTGCTTT AATAGCTACG GAACCAGTTG ACATTGAATA CCCAACTTTC TTGTACAAAG
1321Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)