Construct: ORF ccsbBroadEn_12402

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004784.1_s300c1, BRDN0000397874
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANKRD36B (57730)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57730 ANKRD36B ankyrin repeat domain 36B NM_001353337.2 63% 62.7% 450_451insAAT;452T>A;453_454ins261
2 human 375248 ANKRD36 ankyrin repeat domain 36 NM_198555.4 58.9% 57.7% (many diffs)
3 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511557.3 29.6% 28.8% (many diffs)
4 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511558.2 29.6% 28.8% (many diffs)
5 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511555.2 29.2% 28.4% (many diffs)
6 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511556.2 29.2% 28.4% (many diffs)
7 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004584.2 19% 18.5% (many diffs)
8 human 57730 ANKRD36B ankyrin repeat domain 36B XR_002959321.1 18.9% (many diffs)
9 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004579.2 18% 17.5% (many diffs)
10 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004580.2 18% 17.5% (many diffs)
11 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004581.2 18% 17.5% (many diffs)
12 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004582.2 18% 17.5% (many diffs)
13 human 57730 ANKRD36B ankyrin repeat domain 36B XR_001738869.2 17.7% (many diffs)
14 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004578.2 17.6% 17.1% (many diffs)
15 human 57730 ANKRD36B ankyrin repeat domain 36B NM_025190.3 17.6% 17.1% (many diffs)
16 human 57730 ANKRD36B ankyrin repeat domain 36B XM_005263995.5 17.6% 17.1% (many diffs)
17 human 57730 ANKRD36B ankyrin repeat domain 36B XM_006712661.2 17.6% 17.1% (many diffs)
18 human 375248 ANKRD36 ankyrin repeat domain 36 XM_011511131.1 16.8% 15.6% (many diffs)
19 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004583.2 16.6% 14.1% (many diffs)
20 human 375248 ANKRD36 ankyrin repeat domain 36 XR_001738741.1 14.8% (many diffs)
21 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004044.1 13% 12.1% (many diffs)
22 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004045.1 13% 12.1% (many diffs)
23 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004039.1 12.7% 11.9% (many diffs)
24 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004040.1 12.7% 11.9% (many diffs)
25 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004041.1 12.7% 11.9% (many diffs)
26 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004043.1 12.7% 11.9% (many diffs)
27 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004025.1 12.5% 11.6% (many diffs)
28 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004026.1 12.5% 11.6% (many diffs)
29 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004027.1 12.5% 11.6% (many diffs)
30 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004028.1 12.5% 11.6% (many diffs)
31 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004030.1 12.5% 11.6% (many diffs)
32 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004031.1 12.5% 11.6% (many diffs)
33 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004032.1 12.5% 11.6% (many diffs)
34 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004033.1 12.5% 11.6% (many diffs)
35 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004034.1 12.5% 11.6% (many diffs)
36 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004035.1 12.5% 11.6% (many diffs)
37 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004036.1 12.5% 11.6% (many diffs)
38 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004037.1 12.5% 11.6% (many diffs)
39 human 375248 ANKRD36 ankyrin repeat domain 36 XM_024452877.1 12.5% 11.6% (many diffs)
40 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004011.1 12.3% 11.4% (many diffs)
41 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004012.1 12.3% 11.4% (many diffs)
42 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004013.1 12.3% 11.4% (many diffs)
43 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004014.1 12.3% 11.4% (many diffs)
44 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004015.1 12.3% 11.4% (many diffs)
45 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004016.1 12.3% 11.4% (many diffs)
46 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004017.1 12.3% 11.4% (many diffs)
47 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004018.1 12.3% 11.4% (many diffs)
48 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004019.1 12.3% 11.4% (many diffs)
49 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004020.1 12.3% 11.4% (many diffs)
50 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004021.1 12.3% 11.4% (many diffs)
51 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004022.1 12.3% 11.4% (many diffs)
52 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004023.1 12.3% 11.4% (many diffs)
53 human 57730 ANKRD36B ankyrin repeat domain 36B XR_922976.2 12.2% (many diffs)
54 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004010.1 12.1% 11.2% (many diffs)
55 human 375248 ANKRD36 ankyrin repeat domain 36 NM_001354587.1 12% 11.2% (many diffs)
56 human 375248 ANKRD36 ankyrin repeat domain 36 XM_006712514.3 12% 11.2% (many diffs)
57 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004009.1 12% 11.2% (many diffs)
58 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004024.1 11.5% 9.8% (many diffs)
59 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959292.1 11.2% (many diffs)
60 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959293.1 10.6% (many diffs)
61 human 400986 ANKRD36C ankyrin repeat domain 36C NM_001310154.3 10.5% 9.6% (many diffs)
62 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959294.1 7.6% (many diffs)
63 human 375248 ANKRD36 ankyrin repeat domain 36 XR_922917.2 6.7% (many diffs)
64 human 375248 ANKRD36 ankyrin repeat domain 36 XR_001738739.2 6.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
783
ORF length:
717
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA GCGCTTGTGC TCGGATGGCT TCGCATTTCC CCATTACTAC ATTAAACCGT
121ATCATCTGAA GAGGATCCAC AGAGCTGTCT TACGTGGTAA TCTGGAGAAA CTGAAGTACC
181TTCTGCTCAC GTATTATGAC GCCAATAAGA GAGACAGGAA GGAAAGGACT GCCCTACATT
241TGGCCTGTGC CACTGGCCAA CCGGAAATGG TACATCTCCT GGTGTCCAGA AGATGTGAGC
301TTAACCTCTG CGACCGTGAA GACAGGACAC CTCTGATCAA GGCTGTACAA CTGAGGCAGG
361AGGCTTGTGC AACTCTTCTG CTGCAAAATG GCGCCGATCC AAATATTACG GATGTCTTTG
421GAAGGACTGC TCTGCACTAC GCTGTGTATA ATGAAGATAC ATCCATGATA GAAAAACTTC
481TTTCACATGG TACAAATATT GAAGAATGCA GCAAGAATGA ATATCAGCCA CTGTTACTTG
541CTGTGAGTCG AAGAAAAGTG AAAATGGTGG AATTTTTATT AAAGAAAAAA GCAAATGTAA
601ATGCCATTGA TTATCTTGGC AGATCAGCCC TCATACTTGC TGTTACTCTT GGAGAAAAAG
661ATATAGTCAT TCTTCTTCTG CAGCACAATA TTGATGTGTT TTCTCGAGAT GTGTATGGAA
721AACTTGCAGA AGATTATGCC AGTGAGGCTG AGAATAGAGT TGTCTCCTCA GAAACAACCA
781GCTGCCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
841gcaacgaac

Download FASTA (ORF) (Full)