Construct: ORF ccsbBroadEn_12414

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015094.1_s300c1, BRDN0000393836
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF462 (58499)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 58499 ZNF462 zinc finger protein 462 NM_001347997.2 46.6% 34.4% (many diffs)
2 human 58499 ZNF462 zinc finger protein 462 XM_017014998.2 46.6% 34.4% (many diffs)
3 human 58499 ZNF462 zinc finger protein 462 XM_006717218.4 44.9% 33.3% (many diffs)
4 human 58499 ZNF462 zinc finger protein 462 NM_021224.6 35.2% 35.2% 1_4866del;5483A>G;7218T>A
5 human 58499 ZNF462 zinc finger protein 462 XM_006717216.4 35.2% 35.2% 1_4866del;5483A>G;7218T>A
6 human 58499 ZNF462 zinc finger protein 462 XM_006717215.4 34.4% 34.4% (many diffs)
7 human 58499 ZNF462 zinc finger protein 462 XM_006717209.4 34.4% 34.3% (many diffs)
8 human 58499 ZNF462 zinc finger protein 462 XM_006717211.4 34.4% 34.3% (many diffs)
9 human 58499 ZNF462 zinc finger protein 462 XM_006717212.4 34.4% 34.3% (many diffs)
10 human 58499 ZNF462 zinc finger protein 462 XM_017014996.2 34.4% 34.3% (many diffs)
11 human 58499 ZNF462 zinc finger protein 462 XM_017014997.2 34.4% 34.3% (many diffs)
12 human 58499 ZNF462 zinc finger protein 462 XM_024447629.1 34.4% 34.3% (many diffs)
13 mouse 242466 Zfp462 zinc finger protein 462 NM_172867.3 32.2% 33.3% (many diffs)
14 mouse 242466 Zfp462 zinc finger protein 462 XM_011250033.1 31.9% 33% (many diffs)
15 mouse 242466 Zfp462 zinc finger protein 462 XM_011250032.1 31.9% 33% (many diffs)
16 mouse 242466 Zfp462 zinc finger protein 462 XM_011250031.1 31.4% 32.6% (many diffs)
17 mouse 242466 Zfp462 zinc finger protein 462 XM_006537915.1 31.4% 32.5% (many diffs)
18 mouse 242466 Zfp462 zinc finger protein 462 XM_006537916.1 31.4% 32.5% (many diffs)
19 mouse 242466 Zfp462 zinc finger protein 462 XM_006537917.3 31.4% 32.5% (many diffs)
20 mouse 242466 Zfp462 zinc finger protein 462 XM_006537918.3 31.4% 32.5% (many diffs)
21 mouse 242466 Zfp462 zinc finger protein 462 XM_006537919.2 31.4% 32.5% (many diffs)
22 mouse 242466 Zfp462 zinc finger protein 462 XM_017320199.1 29.9% 30.9% (many diffs)
23 mouse 242466 Zfp462 zinc finger protein 462 XM_011250035.1 29.2% 30.1% (many diffs)
24 mouse 242466 Zfp462 zinc finger protein 462 XM_017320200.1 16.6% 17.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2718
ORF length:
2652
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC CACTGAAGTG AGCCCTTCCC AAGTCTCCAT CACTGAGGAG GAGGTGGGAG
121AGGAGCCCGT GTCCACTTCT CACTTCTCTA CCTCCCACCT GGTCTCCCAC ACTGTGTTCC
181GGTGCCAGCT CTGCAAGTAC TTCTGCTCCA CGAGGAAGGG GATCGCCAGG CACTACCGCA
241TCAAGCACAA TAATGTCCGA GCCCAGCCAG AAGGCAAGAA CAACCTCTTC AAGTGTGCCC
301TGTGTGCCTA CACCAACCCC ATCCGCAAAG GTCTGGCAGC CCACTACCAG AAGCGCCACG
361ACATTGATGC GTATTACACT CACTGCTTGG CAGCCTCCAG GACCATCAGC GACAAGCCCA
421ACAAAGTGAT CATCCCATCC CCGCCCAAGG ACGACTCCCC TCAGCTGAGC GAGGAACTCC
481GGCGGGCAGT GGAGAAGAAA AAGTGCTCCT TGTGCTCTTT CCAGTCGTTC AGCAAGAAGG
541GCATCGTGTC CCATTACATG AAACGCCACC CAGGGGTGTT CCCAAAGAAG CAGCACGCCA
601GCAAGTTGGG GGGCTACTTC ACGGCCGTCT ATGCAGATGA GCATGAGAAG CCCACACTGA
661TGGAAGAAGA GGAGAGAGGC AGCTTTGAGA AAGCCGAGGT GGAGGGTGAA GCTCAGGAAA
721TCGAGTGGCT CCCATTCCGC TGCATCAAAT GCTTCAAGCT GTCCTTTAGC ACTGCAGAGC
781TGCTGTGCAT GCATTACACT GACCACCACA GTCGGGACCT AAAGAGGGAC TTCATCATTC
841TGGGCAACGG CCCCCGCTTG CAGAACTCCA CCTACCAGTG TAAGCACTGT GATAGCAAAC
901TGCAAAGCAC AGCCGAGCTG ACCTCACACT TGAACATTCA CAATGAGGAA TTCCAGAAGC
961GTGCCAAACG TCAGGAGAGG AGGAAACAGC TTTTGAGCAA GCAGAAATAT GCAGATGGTG
1021CTTTTGCAGA TTTCAAACAA GAGAGGCCTT TTGGTCACTT AGAAGAGGTG CCAAAGATCA
1081AGGAGAGGAA AGTGGTGGGC TACAAATGTA AATTCTGTGT GGAAGTGCAC CCAACGCTCC
1141GAGCCATCTG CAATCACCTC CGAAAGCACG TCCAGTATGG CAATGTCCCA GCTGTGTCAG
1201CTGCTGTGAA GGGGCTGCGT TCTCATGAGA GGAGCCACCT GGCCCTGGCC ATGTTTACCC
1261GCGAGGACAA GTACAGCTGC CAGTATTGCT CGTTTGTTTC TGCTTTCAGG CACAATTTGG
1321ATCGCCATAT GCAAACCCAC CACGGACACC ATAAACCATT CCGATGCAAA CTCTGCTCCT
1381TCAAGTCCTC CTATAACAGC CGGCTGAAAA CACATATACT CAAAGCTCAT GCTGGTGAGC
1441ATGCCTACAA GTGTTCTTGG TGCTCATTCT CCACCATGAC AATCAGCCAG CTGAAGGAAC
1501ACTCCCTCAA GGTCCACGGA AAAGCCCTGA CCCTCCCCAG GCCACGGATC GTCAGTCTCC
1561TCTCCTCACA CTCCCACCAC TCCTCCCAAA AAGCTACCCC GGCTGAAGAA GTGGAAGACT
1621CCAATGACTC ATCATATTCA GAGCCCCCAG ATGTTCAGCA GCAGTTGAAC CACTATCAGT
1681CAGCTGCCCT GGCAAGGAAC AACAGCCGTG TTAGCCCTGT GCCTCTTTCT GGGGCTGCTG
1741CTGGCACTGA GCAGAAAACT GAAGCCGTGC TTCACTGCGA ATTCTGTGAA TTCTCCTCCG
1801GCTACATCCA GAGCATCAGG CGTCATTACC GGGACAAGCA TGGTGGGAAG AAGCTTTTCA
1861AGTGCAAAGA CTGCTCCTTT TACACAGGCT TTAAATCTGC TTTTACTATG CACGTGGAAG
1921CTGGGCACTC AGCAGTTCCC GAGGAGGGCC CCAAAGATCT TCGCTGTCCT CTCTGCCTCT
1981ATCACACCAA ATACAAGCGC AACATGATTG ACCACATCGT GCTGCACCGA GAAGAGCGTG
2041TTGTCCCCAT TGAAGTTTGC CGGTCCAAAC TGTCCAAATA CTTGCAGGGA GTAGTTTTCC
2101GCTGTGATAA GTGTACCTTC ACCTGCTCCA GTGATGAGAG CCTCCAGCAA CATATAGAAA
2161AGCACAATGA ACTGAAACCT TACAAATGCC AGCTCTGCTA CTATGAGACC AAGCACACGG
2221AGGAACTGGA CAGCCACCTT CGGGATGAGC ATAAGGTAAG CCGTAACTTT GAGCTGGTTG
2281GACGGGTTAA CTTGGATCAG CTGGAACAGA TGAAGGAGAA AATGGAGAGC TCCAGCAGCG
2341ATGATGAGGA CAAGGAAGAA GAAATGAACA GCAAGGCTGA AGACAGAGAG CTGATGAGAT
2401TTTCTGACCA CGGGGCAGCT CTTAACACTG AGAAGCGTTT TCCATGTGAA TTTTGTGGAC
2461GGGCGTTTTC ACAGGGCTCT GAGTGGGAAA GACATGTGCT GAGACACGGC ATGGCATTGA
2521ATGACACCAA GCAGGTGAGC AGAGAAGAAA TCCACCCAAA AGAGATCATG GAGAACAGTG
2581TTAAAATGCC CTCCATAGAG GAAAAGGAAG ATGACGAGGC CATTGGGATA GACTTTTCCC
2641TAAAGAATGA AACAGTAGCC ATCTGTGTAG TAACTGCCGA CAAATCTCTC CTGGAGAATG
2701CAGAGGCCAA AAAAGAATGC CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt
2761gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)