Construct: ORF ccsbBroadEn_12416

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005920.1_s300c1, BRDN0000387804
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARHGAP22 (58504)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 58504 ARHGAP22 Rho GTPase activating prote... NM_001256024.2 99.9% 100% 330C>T;639A>G
2 human 58504 ARHGAP22 Rho GTPase activating prote... XM_011540002.2 98.5% 97.7% (many diffs)
3 human 58504 ARHGAP22 Rho GTPase activating prote... XM_011540003.1 98.5% 97.7% (many diffs)
4 human 58504 ARHGAP22 Rho GTPase activating prote... XM_024448099.1 98.5% 97.7% (many diffs)
5 human 58504 ARHGAP22 Rho GTPase activating prote... NM_021226.4 97.6% 97.7% 330C>T;449_450ins48;591A>G
6 human 58504 ARHGAP22 Rho GTPase activating prote... NM_001256025.3 96.3% 95.5% (many diffs)
7 human 58504 ARHGAP22 Rho GTPase activating prote... NM_001347738.2 96.3% 95.5% (many diffs)
8 human 58504 ARHGAP22 Rho GTPase activating prote... NM_001347735.2 91.6% 91.7% 318_319ins177;462A>G
9 human 58504 ARHGAP22 Rho GTPase activating prote... XM_011540006.2 90.3% 89.5% (many diffs)
10 human 58504 ARHGAP22 Rho GTPase activating prote... XM_005270014.3 86.8% 85.2% (many diffs)
11 human 58504 ARHGAP22 Rho GTPase activating prote... XM_011540005.1 86.7% 85.4% (many diffs)
12 human 58504 ARHGAP22 Rho GTPase activating prote... NM_001256026.2 84.4% 83.1% (many diffs)
13 human 58504 ARHGAP22 Rho GTPase activating prote... XM_011540011.2 78% 77% (many diffs)
14 human 58504 ARHGAP22 Rho GTPase activating prote... XM_011540012.3 77.1% 77% (many diffs)
15 human 58504 ARHGAP22 Rho GTPase activating prote... XM_017016471.2 77.1% 77% (many diffs)
16 human 58504 ARHGAP22 Rho GTPase activating prote... NR_144645.2 73.4% (many diffs)
17 human 58504 ARHGAP22 Rho GTPase activating prote... XR_002956998.1 69.2% (many diffs)
18 human 58504 ARHGAP22 Rho GTPase activating prote... NR_144646.2 67.8% (many diffs)
19 human 58504 ARHGAP22 Rho GTPase activating prote... XR_001747166.2 66.8% (many diffs)
20 human 58504 ARHGAP22 Rho GTPase activating prote... NR_144643.2 64.4% (many diffs)
21 human 58504 ARHGAP22 Rho GTPase activating prote... XR_002957004.1 64.2% (many diffs)
22 human 58504 ARHGAP22 Rho GTPase activating prote... NR_144642.2 62.8% (many diffs)
23 human 58504 ARHGAP22 Rho GTPase activating prote... XR_002956999.1 61.4% (many diffs)
24 human 58504 ARHGAP22 Rho GTPase activating prote... NR_144644.2 60.5% (many diffs)
25 human 58504 ARHGAP22 Rho GTPase activating prote... NR_045675.2 59.9% (many diffs)
26 human 58504 ARHGAP22 Rho GTPase activating prote... XR_002957001.1 56.3% (many diffs)
27 human 58504 ARHGAP22 Rho GTPase activating prote... XM_024448101.1 55.4% 55.4% 0_1ins954
28 human 58504 ARHGAP22 Rho GTPase activating prote... XM_011540013.3 54.8% 45.6% (many diffs)
29 human 58504 ARHGAP22 Rho GTPase activating prote... XM_017016476.1 53.5% 45.1% (many diffs)
30 human 58504 ARHGAP22 Rho GTPase activating prote... XM_024448100.1 52.6% 43.5% (many diffs)
31 human 58504 ARHGAP22 Rho GTPase activating prote... XM_011540015.3 47.9% 46.7% (many diffs)
32 human 58504 ARHGAP22 Rho GTPase activating prote... XR_002957000.1 44.1% (many diffs)
33 human 58504 ARHGAP22 Rho GTPase activating prote... XR_002957003.1 40.8% (many diffs)
34 human 58504 ARHGAP22 Rho GTPase activating prote... XR_002957002.1 40.5% (many diffs)
35 human 58504 ARHGAP22 Rho GTPase activating prote... XM_024448102.1 16.4% 14.1% (many diffs)
36 human 58504 ARHGAP22 Rho GTPase activating prote... XM_024448103.1 15.6% 13.7% (many diffs)
37 human 58504 ARHGAP22 Rho GTPase activating prote... XM_024448104.1 15.5% 13.9% (many diffs)
38 human 58504 ARHGAP22 Rho GTPase activating prote... XM_024448105.1 15% 13.7% (many diffs)
39 human 58504 ARHGAP22 Rho GTPase activating prote... NM_001347737.1 11.2% 10.9% (many diffs)
40 human 58504 ARHGAP22 Rho GTPase activating prote... NM_001347736.1 10.7% 9.5% (many diffs)
41 human 58504 ARHGAP22 Rho GTPase activating prote... XM_024448106.1 10.7% 9.5% (many diffs)
42 mouse 239027 Arhgap22 Rho GTPase activating prote... XM_017316007.1 42.2% 41.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2211
ORF length:
2142
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCTGAGCCCA AAGATCAGGC AGGCCAGGAG GGCCCGCTCC AAAAGCCTAG
121TGATGGGGGA GCAGAGCCGG AGCCCTGGGC GGATGCCGTG CCCTCACAGG CTGGGCCCCG
181TGCTGAAGGC GGGCTGGCTG AAGAAGCAGA GGAGCATCAT GAAGAACTGG CAGCAGCGCT
241GGTTTGTGCT GCGTGGGGAT CAGCTTTTCT ACTACAAGGA CAAAGATGAG ATCAAGCCCC
301AGGGATTTAT TTCTCTACAA GGGACACAGG TGACTGAACT TCCTCCTGGC CCCGAGGACC
361CAGGGAAGCA CCTCTTTGAG ATCAGCCCAG GTGGTGCTGG GGAGCGGGAG AAGGTGCCGG
421CCAACCCCGA GGCGCTCCTG CTCATGGCCA GCTCCCAGCG TGACATGGAG GACTGGGTGC
481AGGCCATCCG CCGAGTCATC TGGGCCCCGC TGGGCGGAGG TACTGCCCGT AGATCGCATG
541CCCACCCTCT AGAACCCTTG CCTCCAGGGA TCTTTGGGCA GCGCCTAGAG GAAACAGTCC
601ACCACGAGCG GAAGTATGGC CCCCGCCTGG CGCCCCTGCT GGTGGAGCAG TGTGTGGACT
661TCATCCGGGA GCGCGGGCTC ACTGAGGAGG GGCTGTTCCG CATGCCGGGC CAGGCCAACC
721TGGTGAGGGA CCTGCAGGAT TCCTTCGACT GTGGGGAGAA GCCACTGTTT GACAGCACAA
781CAGACGTGCA CACGGTGGCC TCCCTGCTGA AGCTGTACCT GCGGGAGCTC CCCGAGCCCG
841TGGTCCCCTT CGCCAGGTAC GAGGACTTCC TCAGCTGCGC CCAGCTGCTC ACCAAGGACG
901AGGGGGAGGG CACTCTGGAG TTGGCTAAAC AAGTGAGCAA CCTTCCTCAG GCAAATTACA
961ACCTGCTCAG ATACATCTGC AAGTTTCTGG ATGAAGTTCA GGCATACTCA AATGTCAACA
1021AGATGAGTGT CCAGAATCTG GCAACCGTTT TTGGACCTAA CATTCTGCGG CCACAGGTAG
1081AGGACCCAGT AACCATCATG GAAGGCACTT CCCTCGTCCA GCACCTGATG ACCGTCCTCA
1141TCCGCAAACA CAGCCAGCTC TTCACGGCAC CGGTCCCGGA AGGGCCCACC TCCCCGCGCG
1201GGGGCCTGCA ATGCGCAGTG GGGTGGGGCT CCGAGGAGGT CACCAGGGAC AGCCAAGGAG
1261AGCCCGGCGG CCCCGGCCTG CCCGCGCACA GGACCTCTTC CCTGGACGGG GCGGCCGTGG
1321CGGTGCTCTC CAGAACAGCC CCCACGGGGC CGGGGAGCCG GTGCAGCCCT GGGAAGAAGG
1381TGCAGACCCT GCCCAGTTGG AAGTCCTCCT TCCGGCAGCC GAGGTCCCTA TCGGGAAGCC
1441CGAAGGGGGG CGGCTCATCC CTGGAGGTGC CCATCATCTC CTCCGGCGGG AACTGGCTTA
1501TGAACGGGCT GTCCTCCCTG CGCGGACACC GCCGGGCCTC GTCGGGAGAC CGGCTCAAGG
1561ACTCGGGCTC CGTGCAGAGA CTCTCCACCT ACGACAATGT GCCCGCGCCG GGCCTGGTCC
1621CCGGCATACC CAGCGTGGCC AGTATGGCGT GGTCCGGGGC CTCGTCCAGC GAGTCGTCGG
1681TGGGGGGCTC ACTCAGCAGC TGCACGGCCT GCCGCGCCAG CGACTCGTCT GCCCGCAGTT
1741CCCTGCACAC CGACTGGGCC CTGGAGCCCT CCCCGCTCCC CAGCAGCAGC GAGGACCCCA
1801AGTCCCTGGA CCTGGACCAC AGCATGGACG AGGCGGGCGC GGGTGCCAGC AACAGCGAGC
1861CCAGCGAGCC GGACAGCCCC ACCCGGGAAC ACGCGCGCCG CTCCGAGGCC TTACAGGGGC
1921TGGTCACTGA GCTCAGGGCC GAGCTGTGCC GCCAGCGGAC TGAGTACGAG AGGAGTGTGA
1981AAAGAATCGA AGAAGGGAGT GCTGACCTGA GAAAACGAAT GTCCCGGTTA GAAGAAGAAC
2041TGGACCAGGA AAAGAAAAAA TACATCATGC TGGAAATAAA GCTGCGGAAC TCTGAACGGG
2101CGCGGGAGGA TGCGGAGAGG AGGAACCAGC TGTTGCAGAG GGAAATGGAG GAGTTTTTTT
2161CGACCCTAGG AAGCTTGACT GTTGGGGCAA AAGGTGCCAG GGCCCCAAAG TTGCCAACTT
2221TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)

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